Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn061s42067 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn069s42367 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn098s43115 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn119s43472 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn139s43902 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn185s44669 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn208s45111 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn227s45449 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn247s45810 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn273s46056 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn5g28945 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-100 369.8 186 100.0
Nn069s42322 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-34 150.6 79 93.7
Nn090s42844 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-34 150.6 79 93.7
Nn5g31316 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.2e-34 150.6 79 93.7
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 1.6e-34 150.2 119 68.1
Nn5g27161 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.8e-27 126.7 68 83.8
Nn267s45958 Nelumbo nucifera HOM05D006450 ORTHO05D001777 5.9e-26 121.7 67 91.0
Nn6g32587 Nelumbo nucifera HOM05D006450 ORTHO05D001777 5.9e-26 121.7 67 91.0
Nn6g32608 Nelumbo nucifera HOM05D006450 ORTHO05D001777 5.9e-26 121.7 67 91.0
Nn6g32609 Nelumbo nucifera HOM05D006450 ORTHO05D001777 5.9e-26 121.7 67 91.0
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 7.7e-26 121.3 102 68.6
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 7.7e-26 121.3 102 68.6
Nn077s42609 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn213s45222 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn213s45244 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn236s45570 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn236s45592 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn372s46518 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20478 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20560 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20582 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20596 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20627 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn3g20800 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.0e-25 120.9 67 92.5
Nn154s44283 Nelumbo nucifera HOM05D006450 ORTHO05D001777 1.3e-25 120.6 67 92.5
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 1.7e-25 120.2 122 59.8
Medtr0052s0090 Medicago truncatula HOM05D006450 ORTHO05D001777 2.3e-25 119.8 119 58.0
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-25 119.4 102 67.6
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 5.0e-25 118.6 102 67.6
Nn6g32469 Nelumbo nucifera HOM05D006450 ORTHO05D001777 8.6e-25 117.9 64 92.2
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-24 117.5 102 66.7
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 3.6e-23 112.5 99 65.7
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 3.6e-23 112.5 99 65.7
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 3.6e-23 112.5 98 66.3
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 4.7e-23 112.1 99 65.7
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 1.4e-22 110.5 129 53.5
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 3.0e-22 109.4 99 64.6
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 5.2e-22 108.6 99 64.6
unitig_813.g34363 Utricularia gibba HOM05D006450 ORTHO05D001777 6.8e-22 108.2 101 62.4
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 2.6e-21 106.3 125 52.8
Duzib093G0876 Durio zibethinus HOM05D006450 ORTHO05D001777 2.6e-21 106.3 100 61.0
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 4.4e-21 105.5 129 50.4
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 2.8e-20 102.8 99 61.6
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 4.9e-20 102.1 130 49.2
LjContig00372g0003179 Lotus japonicus HOM05D006450 ORTHO05D001777 2.4e-19 99.8 119 50.4
LjContig00479g0011945 Lotus japonicus HOM05D006450 ORTHO05D001777 2.4e-19 99.8 119 50.4
Nn077s42586 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.4e-19 99.8 56 89.3
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 4.1e-19 99.0 125 50.4
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 4.1e-19 99.0 125 49.6
unitig_102.g31719 Utricularia gibba HOM05D006450 ORTHO05D001777 4.1e-19 99.0 100 56.0
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 7.0e-19 98.2 121 52.1
Duzib093G0575 Durio zibethinus HOM05D006450 ORTHO05D001777 9.2e-19 97.8 99 56.6
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 9.2e-19 97.8 97 58.8
A06p24400 Brassica napus HOM05D006450 ORTHO05D001777 1.6e-18 97.1 121 52.1
Duzib093G1336 Durio zibethinus HOM05D006450 ORTHO05D001777 2.7e-18 96.3 87 64.4
LjContig00547g0007783 Lotus japonicus HOM05D007851 ORTHO05D007849 2.7e-18 96.3 70 71.4
LjContig00006g0004286 Lotus japonicus HOM05D006450 ORTHO05D001777 5.9e-18 95.1 119 48.7
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 1.0e-17 94.4 118 51.7
unitig_807.g34415 Utricularia gibba HOM05D006450 ORTHO05D001777 1.3e-17 94.0 101 58.4
Nn6g33207 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.9e-17 92.8 78 61.5
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 6.6e-17 91.7 120 50.0
A05p22370 Brassica napus HOM05D006450 ORTHO05D001777 8.6e-17 91.3 118 50.8
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-16 90.9 109 53.2
A06p24520 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-16 90.9 118 51.7
unitig_668.g29656 Utricularia gibba HOM05D006450 ORTHO05D001777 1.1e-16 90.9 100 56.0
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 1.5e-16 90.5 82 63.4
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 1.5e-16 90.5 82 63.4
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 3.3e-16 89.4 117 50.4
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 4.3e-16 89.0 118 49.2
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 5.6e-16 88.6 110 52.7
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 7.3e-16 88.2 115 50.4
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 3.6e-15 85.9 77 64.9
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 3.6e-15 85.9 97 56.7
LjContig00371g0016194 Lotus japonicus HOM05D000099 ORTHO05D000205 3.6e-15 85.9 74 64.9
Medtr0152s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 4.7e-15 85.5 110 50.0
arahy.Tifrunner.gnm1.ann1.FM8SZR Arachis hypogaea HOM05D006450 ORTHO05D001777 5.2e-14 82.0 103 49.5
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 6.8e-14 81.6 40 95.0
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 6.8e-14 81.6 40 95.0
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 8.9e-14 81.3 39 94.9
Duzib250G0002 Durio zibethinus HOM05D000099 ORTHO05D000205 1.2e-13 80.9 78 62.8
unitig_587.g34769 Utricularia gibba HOM05D007851 ORTHO05D007849 1.2e-13 80.9 70 62.9
unitig_644.g34716 Utricularia gibba HOM05D006450 ORTHO05D001777 1.2e-13 80.9 70 62.9
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 1.5e-13 80.5 38 97.4
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 1.5e-13 80.5 38 97.4
unitig_836.g33490 Utricularia gibba HOM05D011479 ORTHO05D007849 2.0e-13 80.1 40 92.5
unitig_96.g33467 Utricularia gibba HOM05D011479 ORTHO05D007849 2.0e-13 80.1 40 92.5
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 3.4e-13 79.3 40 92.5
unitig_124.g30877 Utricularia gibba HOM05D006450 ORTHO05D001777 4.4e-13 79.0 69 62.3
unitig_579.g34820 Utricularia gibba HOM05D007851 ORTHO05D007849 4.4e-13 79.0 69 62.3
Nn230s45554 Nelumbo nucifera HOM05D002905 ORTHO05D001777 5.8e-13 78.6 47 89.4
Nn289s46186 Nelumbo nucifera HOM05D002905 ORTHO05D001777 5.8e-13 78.6 47 89.4
Nn4g25113 Nelumbo nucifera HOM05D002905 ORTHO05D001777 5.8e-13 78.6 47 89.4
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 7.5e-13 78.2 40 92.5
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 7.5e-13 78.2 40 90.0
LjContig00098g0020910 Lotus japonicus HOM05D000099 ORTHO05D000205 7.5e-13 78.2 51 76.5
unitig_245.g35376 Utricularia gibba HOM05D006450 ORTHO05D007849 7.5e-13 78.2 78 57.7
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 9.8e-13 77.8 46 82.6
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 1.3e-12 77.4 110 49.1
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 1.7e-12 77.0 40 87.5
unitig_8.g4071 Utricularia gibba HOM05D006450 ORTHO05D001777 2.2e-12 76.6 40 87.5
Sed0026508 Sechium edule HOM05D003742 ORTHO05D001777 2.9e-12 76.3 38 92.1
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 3.7e-12 75.9 40 90.0
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 4.9e-12 75.5 40 90.0
Cpa.g.sc121.11 Carica papaya HOM05D006450 ORTHO05D001777 4.9e-12 75.5 40 87.5
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 8.3e-12 74.7 40 90.0
Nn252s45879 Nelumbo nucifera HOM05D002905 ORTHO05D001777 8.3e-12 74.7 58 72.4
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 2.4e-11 73.2 35 94.3
BNapus_Darmor_BZH_scaffold_181p00010 Brassica napus HOM05D006450 ORTHO05D001777 3.2e-11 72.8 91 54.9
MBI05_g46483_MAGBIO Magnolia biondii HOM05D000099 ORTHO05D001777 3.9e-09 65.9 67 56.7
Nn268s45981 Nelumbo nucifera HOM05D002905 ORTHO05D001777 8.6e-09 64.7 50 76.0
Nn110s43309 Nelumbo nucifera HOM05D002905 ORTHO05D001777 1.9e-08 63.5 39 74.4
Nn062s42138 Nelumbo nucifera HOM05D002905 ORTHO05D001777 7.3e-08 61.6 38 73.7
Nn435s46667 Nelumbo nucifera HOM05D002905 ORTHO05D001777 7.3e-08 61.6 50 60.0
Nn6g32493 Nelumbo nucifera HOM05D002905 ORTHO05D001777 7.3e-08 61.6 38 73.7
Nn8g41329 Nelumbo nucifera HOM05D002905 ORTHO05D001777 7.3e-08 61.6 38 73.7
unitig_631.g33698 Utricularia gibba HOM05D006450 ORTHO05D001777 7.3e-08 61.6 76 52.6
Medtr0152s0120 Medicago truncatula HOM05D000099 ORTHO05D000205 1.6e-07 60.5 36 75.0
Lj2g0005038 Lotus japonicus HOM05D000099 ORTHO05D000205 2.8e-07 59.7 36 75.0
Mapoly0011s0192 Marchantia polymorpha HOM05D006450 ORTHO05D001777 2.8e-07 59.7 40 70.0
Nn129s43748 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
Nn153s44271 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
Nn202s44954 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
Nn394s46554 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
Nn5g27334 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
Nn7g38491 Nelumbo nucifera HOM05D002905 ORTHO05D001777 2.8e-07 59.7 90 42.2
TAR629G0253 Trochodendron aralioides HOM05D000099 ORTHO05D000205 6.2e-07 58.5 73 49.3
DCAR_032322 Daucus carota HOM05D006450 ORTHO05D001777 8.0e-07 58.2 64 54.7
TAR629G1164 Trochodendron aralioides HOM05D000099 ORTHO05D000205 8.0e-07 58.2 73 49.3
Duzib093G0810 Durio zibethinus HOM05D000099 ORTHO05D000205 5.2e-06 55.5 76 50.0
SHI35529 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI35534 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI35537 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI38617 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI38620 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI39807 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI39842 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
SHI41311 Sapria himalayana HOM05D000099 ORTHO05D000205 6.8e-06 55.1 30 86.7
LjContig00182g0023147 Lotus japonicus HOM05D000099 ORTHO05D000205 8.9e-06 54.7 74 47.3
LjContig00372g0009140 Lotus japonicus HOM05D000099 ORTHO05D000205 8.9e-06 54.7 74 47.3
LjContig00372g0019103 Lotus japonicus HOM05D000099 ORTHO05D000205 8.9e-06 54.7 74 47.3
unitig_130.g30128 Utricularia gibba HOM05D007851 ORTHO05D001777 8.9e-06 54.7 59 52.5


User provided reference genes

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