Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10177 Nelumbo nucifera HOM05D007099 ORTHO05D009081 2.1e-28 128.3 63 100.0
Lj2P1221T100 Lonicera japonica HOM05D007099 ORTHO05D009081 1.1e-27 125.9 63 98.4
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 2.4e-27 124.8 63 96.8
TPR.G27292 Trifolium pratense HOM05D007099 ORTHO05D009081 4.0e-27 124.0 63 98.4
VMungo0647G1684 Vigna mungo HOM05D007099 ORTHO05D009081 1.2e-26 122.5 63 96.8
Lalb_Chr00c21g0405211 Lupinus albus HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
Lalb_Chr00c21g0405401 Lupinus albus HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
Lalb_Chr00c24g0407161 Lupinus albus HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
Lalb_Chr11g0070131 Lupinus albus HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
Lalb_Chr11g0070211 Lupinus albus HOM05D007099 ORTHO05D009081 2.0e-26 121.7 63 96.8
THA.LOC104825605 Tarenaya hassleriana HOM05D007099 ORTHO05D009081 1.3e-25 119.0 63 95.2
Solyc00g500363.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 3.8e-25 117.5 63 92.1
Glyma.05G091932 Glycine max HOM05D007099 ORTHO05D009081 4.9e-25 117.1 63 93.7
COL.COLO4_06718 Corchorus olitorius HOM05D007099 ORTHO05D009081 1.1e-24 115.9 63 88.9
Thhalv10001274m.g Eutrema salsugineum HOM05D002864 ORTHO05D008485 3.2e-24 114.4 63 93.7
Solyc09g050030.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.6e-23 110.5 63 87.3
Rhsim11G0096700 Rhododendron simsii HOM05D007099 ORTHO05D009081 5.1e-22 107.1 62 80.6
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 6.7e-22 106.7 63 85.7
AL4G30490 Arabidopsis lyrata HOM05D007099 ORTHO05D009081 6.7e-22 106.7 63 81.0
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 6.7e-22 106.7 63 79.4
Nitab4.5_0000068g0330 Nicotiana tabacum HOM05D007099 ORTHO05D009081 1.1e-21 105.9 62 77.4
Nitab4.5_0012613g0010 Nicotiana tabacum HOM05D007099 ORTHO05D009081 1.1e-21 105.9 62 77.4
AT2G34520 Arabidopsis thaliana HOM05D007099 ORTHO05D009081 1.5e-21 105.5 63 81.0
Aa31LG1G28210 Aethionema arabicum HOM05D007099 ORTHO05D009081 1.9e-21 105.1 63 82.5
Carub.0004s1619 Capsella rubella HOM05D007099 ORTHO05D009081 2.5e-21 104.8 63 79.4
CARHR128610 Cardamine hirsuta HOM05D007099 ORTHO05D009081 2.5e-21 104.8 63 76.2
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 2.5e-21 104.8 63 76.2
Cc11_g04750 Coffea canephora HOM05D007099 ORTHO05D009081 4.3e-21 104.0 63 76.2
Solyc04g079380.1 Solanum lycopersicum HOM05D007099 ORTHO05D009081 4.3e-21 104.0 63 76.2
Sopen04g032990 Solanum pennellii HOM05D007099 ORTHO05D009081 4.3e-21 104.0 63 76.2
PGSC0003DMG400007997 Solanum tuberosum HOM05D007099 ORTHO05D009081 4.3e-21 104.0 63 76.2
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 1.3e-20 102.4 63 76.2
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 2.1e-20 101.7 52 98.1
BcaB02g09535 Brassica carinata HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
BcaB06g28779 Brassica carinata HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
A04p26440 Brassica napus HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
A05p11160 Brassica napus HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
C04p63850 Brassica napus HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
BolC4t27852H Brassica oleracea HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
BraA04t18148Z Brassica rapa HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
BraA05t20062Z Brassica rapa HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
Thhalv10017324m.g Eutrema salsugineum HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
Sp4g16780 Schrenkiella parvula HOM05D007099 ORTHO05D009081 3.7e-20 100.9 63 76.2
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 6.3e-20 100.1 54 96.3
MELO3C019879.2 Cucumis melo HOM05D007099 ORTHO05D009081 6.3e-20 100.1 63 73.0
BcaC02g11514 Brassica carinata HOM05D007099 ORTHO05D009081 1.1e-19 99.4 63 74.6
C04p14510 Brassica napus HOM05D007099 ORTHO05D009081 1.1e-19 99.4 63 74.6
BolC4t23034H Brassica oleracea HOM05D007099 ORTHO05D009081 1.1e-19 99.4 63 74.6
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 1.4e-19 99.0 63 77.8
CiPaw.13G036200 Carya illinoinensis HOM05D007099 ORTHO05D009081 1.8e-19 98.6 63 73.0
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 1.8e-19 98.6 62 79.0
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 1.8e-19 98.6 63 74.6
Manes.15G073400 Manihot esculenta HOM05D007099 ORTHO05D009081 2.4e-19 98.2 63 74.6
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 3.1e-19 97.8 63 71.4
CsaV3_2G032930 Cucumis sativus L. HOM05D007099 ORTHO05D009081 6.9e-19 96.7 63 71.4
Potri.001G424950 Populus trichocarpa HOM05D007099 ORTHO05D009081 6.9e-19 96.7 63 71.4
RcHm_v2.0_Chr1g0333591 Rosa chinensis HOM05D007099 ORTHO05D009081 6.9e-19 96.7 63 73.0
Sabra16G0287600 Salix brachista HOM05D007099 ORTHO05D009081 6.9e-19 96.7 63 71.4
PSO541G4216 Papaver somniferum HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 71.4
RcHm_v2.0_Chr5g0056441 Rosa chinensis HOM05D007099 ORTHO05D009081 1.5e-18 95.5 63 71.4
Zm00001eb261270 Zea mays HOM05D002252 ORTHO05D002451 1.5e-18 95.5 63 73.0
Atru.chr1.3070 Acer truncatum HOM05D007099 ORTHO05D009081 2.0e-18 95.1 63 74.6
Atru.chr3.1047 Acer truncatum HOM05D007099 ORTHO05D009081 2.0e-18 95.1 63 74.6
QL04p041158 Quercus lobata HOM05D007099 ORTHO05D009081 2.0e-18 95.1 62 71.0
MD03G1252400 Malus domestica HOM05D007099 ORTHO05D009081 2.6e-18 94.7 63 71.4
MD07G1070600 Malus domestica HOM05D007099 ORTHO05D009081 2.6e-18 94.7 63 71.4
AUR62006089 Chenopodium quinoa HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 71.4
AUR62019404 Chenopodium quinoa HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 71.4
MD07G1069700 Malus domestica HOM05D007099 ORTHO05D009081 3.4e-18 94.4 62 71.0
PSO675G8234 Papaver somniferum HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 69.8
Prupe.2G087000 Prunus persica HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 73.0
Prupe.2G087700 Prunus persica HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 73.0
Prupe.8G094900 Prunus persica HOM05D007099 ORTHO05D009081 3.4e-18 94.4 63 73.0
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 5.9e-18 93.6 54 87.0
FvH4_7g06080 Fragaria vesca HOM05D007099 ORTHO05D009081 5.9e-18 93.6 63 68.3
Cfa011223 Carpinus fangiana HOM05D007099 ORTHO05D009081 7.6e-18 93.2 62 72.6
Cfa011224 Carpinus fangiana HOM05D007099 ORTHO05D009081 7.6e-18 93.2 62 72.6
Haze_02608 Corylus avellana HOM05D007099 ORTHO05D009081 7.6e-18 93.2 62 72.6
FAN06G3861 Fragaria x ananassa HOM05D007099 ORTHO05D009081 7.6e-18 93.2 62 67.7
FAN10G1031 Fragaria x ananassa HOM05D007099 ORTHO05D009081 7.6e-18 93.2 62 67.7
FAN16G1526 Fragaria x ananassa HOM05D007099 ORTHO05D009081 1.3e-17 92.4 62 67.7
Gorai.001G161900 Gossypium raimondii HOM05D007099 ORTHO05D009081 1.3e-17 92.4 45 100.0
PSO541G5582 Papaver somniferum HOM05D007099 ORTHO05D009081 1.3e-17 92.4 63 68.3
Peaxi162Scf01092g00115 Petunia axillaris HOM05D007099 ORTHO05D009081 1.3e-17 92.4 54 81.5
QL10p027581 Quercus lobata HOM05D007099 ORTHO05D009081 1.3e-17 92.4 62 69.4
SalBow8G2603 Salvia bowleyana HOM05D007099 ORTHO05D009081 1.3e-17 92.4 63 73.0
Lsat_1_v5_gn_9_15021 Lactuca sativa HOM05D007099 ORTHO05D009081 2.2e-17 91.7 63 69.8
HanXRQChr10g0308131 Helianthus annuus HOM05D007099 ORTHO05D009081 2.9e-17 91.3 63 68.3
CANSAT56G2898 Cannabis sativa HOM05D007099 ORTHO05D009081 3.8e-17 90.9 63 66.7
Ciclev10022860m.g Citrus clementina HOM05D007099 ORTHO05D009081 5.0e-17 90.5 63 68.3
Mapoly0991s0001 Marchantia polymorpha HOM05D007099 ORTHO05D009081 5.0e-17 90.5 62 74.2
Ah.07g205590 Amaranthus hybridus HOM05D007099 ORTHO05D009081 6.5e-17 90.1 61 70.5
DCAR_014524 Daucus carota HOM05D007099 ORTHO05D009081 1.9e-16 88.6 63 65.1
Atru.chr6.1811 Acer truncatum HOM05D002864 ORTHO05D008485 2.5e-16 88.2 48 91.7
FAN12G2091 Fragaria x ananassa HOM05D007099 ORTHO05D009081 2.5e-16 88.2 61 67.2
SHI18971 Sapria himalayana HOM05D007099 ORTHO05D009081 2.5e-16 88.2 63 66.7
PSO675G5170 Papaver somniferum HOM05D007099 ORTHO05D009081 3.2e-16 87.8 63 68.3
Rhsim10G0009600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.0e-14 82.8 50 80.0
BcaB02g09534 Brassica carinata HOM05D007099 ORTHO05D009081 2.3e-14 81.6 52 73.1
ECA234G1703 Erigeron canadensis HOM05D007099 ORTHO05D009081 1.9e-13 78.6 63 58.7
Phvul.011G109300 Phaseolus vulgaris HOM05D007099 ORTHO05D009081 1.9e-13 78.6 63 68.3
Gohir.A01G126800 Gossypium hirsutum HOM05D007099 ORTHO05D009081 2.5e-13 78.2 38 97.4
Pp3c2_23460 Physcomitrium patens HOM05D007099 ORTHO05D009081 3.7e-12 74.3 53 67.9
Peaxi162Scf36888g00001 Petunia axillaris HOM05D002864 ORTHO05D008485 8.2e-12 73.2 39 89.7
Peaxi162Scf44104g00001 Petunia axillaris HOM05D007099 ORTHO05D009081 8.2e-12 73.2 39 89.7
SMO134G0293 Selaginella moellendorffii HOM05D007099 ORTHO05D009081 1.4e-11 72.4 56 64.3
FvH4_3g30490 Fragaria vesca HOM05D007099 ORTHO05D009081 5.9e-10 67.0 46 67.4
FAN11G0918 Fragaria x ananassa HOM05D007099 ORTHO05D009081 5.9e-10 67.0 46 67.4
ClCG01G010070 Citrullus lanatus HOM05D007099 ORTHO05D009081 7.7e-10 66.6 46 69.6
Nitab4.5_0000120g0100 Nicotiana tabacum HOM05D002864 ORTHO05D008485 2.2e-09 65.1 36 86.1
Cre17.g726300 Chlamydomonas reinhardtii HOM05D007099 ORTHO05D009081 2.1e-07 58.5 65 47.7
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 2.1e-07 58.5 56 51.8
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 2.3e-06 55.1 56 48.2


User provided reference genes

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