Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09944 Nelumbo nucifera HOM05D008696 ORTHO05D010514 6.1e-38 160.2 76 100.0
Nn1g10158 Nelumbo nucifera HOM05D008696 ORTHO05D010514 6.1e-38 160.2 76 100.0
Nn1g10186 Nelumbo nucifera HOM05D008696 ORTHO05D010514 6.1e-38 160.2 76 100.0
Nn1g10035 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.2e-29 130.6 91 74.7
GSVIVG01006665001 Vitis vinifera HOM05D008696 ORTHO05D010514 1.9e-23 112.1 76 75.0
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 5.6e-23 110.5 92 65.2
SHI36694 Sapria himalayana HOM05D008696 ORTHO05D010514 1.2e-20 102.8 83 68.7
Nn1g10032 Nelumbo nucifera HOM05D008696 ORTHO05D010514 4.0e-13 77.8 42 88.1
Sp3g25810 Schrenkiella parvula HOM05D008696 ORTHO05D010514 4.0e-13 77.8 42 88.1
Solyc00g094520.1 Solanum lycopersicum HOM05D008696 ORTHO05D010514 4.0e-13 77.8 42 88.1
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 4.0e-13 77.8 42 88.1
PGSC0003DMG400005437 Solanum tuberosum HOM05D008696 ORTHO05D010514 4.0e-13 77.8 42 88.1
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 4.0e-13 77.8 42 88.1
Lsat_1_v5_gn_5_60661 Lactuca sativa HOM05D008696 ORTHO05D010514 2.6e-12 75.1 35 100.0
arahy.Tifrunner.gnm1.ann1.AT0FGT Arachis hypogaea HOM05D008696 ORTHO05D010514 3.4e-12 74.7 42 85.7
arahy.Tifrunner.gnm1.ann1.D6INMV Arachis hypogaea HOM05D008696 ORTHO05D010514 3.4e-12 74.7 42 85.7
arahy.Tifrunner.gnm1.ann1.FXV2QT Arachis hypogaea HOM05D008696 ORTHO05D010514 3.4e-12 74.7 42 85.7
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 3.4e-12 74.7 42 85.7
arahy.Tifrunner.gnm1.ann1.P4RH3S Arachis hypogaea HOM05D008696 ORTHO05D010514 3.4e-12 74.7 42 85.7
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 3.4e-12 74.7 42 85.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.4e-12 74.7 42 85.7
SHI46655 Sapria himalayana HOM05D008696 ORTHO05D010514 4.4e-12 74.3 60 65.0
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 7.6e-12 73.6 36 97.2
Lsat_1_v5_gn_5_16440 Lactuca sativa HOM05D008696 ORTHO05D010514 7.6e-12 73.6 42 83.3
TPR.G36008 Trifolium pratense HOM05D008696 ORTHO05D010514 9.9e-12 73.2 42 83.3
arahy.Tifrunner.gnm1.ann1.QR678R Arachis hypogaea HOM05D008696 ORTHO05D010514 2.2e-11 72.0 42 81.0
Lsat_1_v5_gn_0_34861 Lactuca sativa HOM05D008696 ORTHO05D010514 3.8e-11 71.2 35 94.3
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 4.9e-11 70.9 39 87.2
Nitab4.5_0008578g0070 Nicotiana tabacum HOM05D008696 ORTHO05D002807 1.9e-10 68.9 42 78.6
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 5.4e-10 67.4 41 80.5
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 7.1e-10 67.0 37 86.5
SHI37562 Sapria himalayana HOM05D008696 ORTHO05D010514 4.6e-09 64.3 37 81.1
SHI36364 Sapria himalayana HOM05D012027 ORTHO05D010514 1.3e-08 62.8 37 81.1
Nitab4.5_0007237g0040 Nicotiana tabacum HOM05D008696 ORTHO05D010514 1.9e-07 58.9 39 74.4
SHI35932 Sapria himalayana HOM05D008696 ORTHO05D010514 9.6e-07 56.6 32 84.4
Nitab4.5_0000307g0370 Nicotiana tabacum HOM05D008696 ORTHO05D010514 1.2e-06 56.2 35 80.0


User provided reference genes

Program Settings