Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 7.2e-56 220.3 110 100.0
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 7.2e-56 220.3 110 100.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 6.3e-52 207.2 110 95.5
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 7.3e-48 193.7 96 97.9
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 1.0e-41 173.3 98 88.8
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 1.7e-41 172.6 99 88.9
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 1.1e-38 163.3 89 89.9
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.3e-36 156.4 89 85.4
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 6.4e-36 154.1 92 81.5
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.1e-34 149.1 97 76.3
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 8.6e-33 143.7 76 90.8
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 8.6e-33 143.7 76 90.8
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.3e-32 141.7 80 86.2
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 4.7e-31 137.9 95 72.6
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 4.4e-29 131.3 81 80.2
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.1e-27 126.7 82 79.3
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 4.1e-27 124.8 66 87.9
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 9.2e-27 123.6 82 76.8
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 1.0e-25 120.2 95 66.3
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 6.6e-25 117.5 90 63.3
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 8.6e-25 117.1 95 65.3
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 8.6e-25 117.1 95 65.3
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.9e-24 115.9 90 64.4
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 2.5e-24 115.5 90 63.3
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 1.2e-23 113.2 90 61.1
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 1.2e-23 113.2 90 61.1
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 2.8e-23 112.1 90 62.2
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 2.8e-23 112.1 91 60.4
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 3.6e-23 111.7 91 59.3
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 4.7e-23 111.3 90 61.1
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 8.1e-23 110.5 91 59.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 8.1e-23 110.5 91 59.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 8.1e-23 110.5 91 59.3
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 3.1e-22 108.6 90 60.0
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 4.0e-22 108.2 89 60.7
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 4.0e-22 108.2 89 60.7
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 5.2e-22 107.8 82 67.1
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 1.2e-21 106.7 84 61.9
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.5e-21 106.3 89 59.6
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.5e-21 106.3 89 59.6
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.5e-21 106.3 89 59.6
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 3.4e-21 105.1 82 67.1
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 4.4e-21 104.8 82 68.3
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 5.8e-21 104.4 82 67.1
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.3e-20 103.2 80 68.8
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 2.2e-20 102.4 106 51.9
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 8.4e-20 100.5 80 63.8
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 3.2e-19 98.6 85 62.4
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 3.2e-19 98.6 83 65.1
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 4.1e-19 98.2 82 62.2
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 7.1e-19 97.4 83 62.7
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 9.2e-19 97.1 82 63.4
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 1.2e-18 96.7 55 81.8
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 2.7e-18 95.5 83 61.4
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 7.8e-18 94.0 105 50.5
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 7.8e-18 94.0 67 74.6
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-17 92.8 74 71.6
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 1.9e-16 89.4 83 61.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 9.6e-16 87.0 60 73.3
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 2.1e-15 85.9 96 51.0
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 1.1e-14 83.6 84 50.0
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.8e-14 82.8 55 74.5
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 4.0e-14 81.6 93 50.5
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 3.4e-13 78.6 48 83.3
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 6.4e-12 74.3 61 63.9
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 6.4e-12 74.3 61 63.9
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 4.6e-10 68.2 54 66.7
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 4.6e-10 68.2 54 66.7
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 1.0e-09 67.0 81 44.4
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 1.0e-09 67.0 81 44.4
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 4.8e-07 58.2 57 50.9
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 4.8e-07 58.2 57 50.9


User provided reference genes

Program Settings