Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.2e-181 638.3 320 100.0
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.8e-131 473.0 253 94.9
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.5e-130 469.9 253 94.5
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 2.4e-128 462.6 250 94.8
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 7.1e-128 461.1 255 92.2
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 6.6e-126 454.5 264 89.4
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.5e-125 453.4 241 95.4
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 2.8e-124 449.1 245 93.5
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.1e-123 447.2 251 92.0
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.1e-117 427.2 215 100.0
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-117 425.6 246 88.6
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 2.3e-110 402.9 239 88.3
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 3.9e-110 402.1 246 85.0
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 4.3e-109 398.7 239 87.4
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 7.4e-109 397.9 239 87.4
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 2.2e-105 386.3 241 83.8
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.7
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.7
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.7
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.3
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.3
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.3
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.3
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.3
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.7
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 5.5e-104 381.7 239 83.7
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 1.3e-102 377.1 240 82.9
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 1.1e-101 374.0 240 82.1
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 3.3e-93 345.9 247 76.1
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 4.3e-93 345.5 247 75.7
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 2.2e-92 343.2 239 78.2
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 6.3e-92 341.7 230 78.3
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 6.3e-92 341.7 230 78.3
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-90 337.4 230 77.8
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 1.7e-89 333.6 245 74.3
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 8.5e-89 331.3 200 83.5
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 5.5e-88 328.6 239 74.9
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 5.5e-88 328.6 231 76.6
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 3.6e-87 325.9 175 95.4
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 1.8e-86 323.6 267 67.0
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 3.9e-86 322.4 239 72.4
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 3.3e-85 319.3 240 74.6
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 1.7e-84 317.0 239 72.4
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 2.8e-84 316.2 183 89.1
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 1.4e-83 313.9 226 75.2
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 1.7e-81 307.0 215 78.6
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 2.2e-76 290.0 240 68.3
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 9.1e-75 284.6 155 93.5
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 1.3e-68 264.2 166 84.3
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 1.7e-57 227.3 248 54.8
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.4e-51 207.6 167 70.1
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 1.7e-49 200.7 133 79.7
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 3.8e-49 199.5 141 76.6
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 8.6e-49 198.4 139 77.7
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 2.5e-48 196.8 141 75.9
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 1.7e-44 184.1 231 49.8
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 2.2e-44 183.7 141 73.8
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.6e-42 176.0 157 65.0
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 1.3e-41 174.5 91 94.5
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 3.0e-41 173.3 154 67.5
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 3.9e-41 172.9 104 84.6
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 1.9e-40 170.6 103 84.5
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 2.5e-40 170.2 120 77.5
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 9.5e-40 168.3 92 90.2
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 2.8e-39 166.8 89 93.3
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 3.6e-39 166.4 126 74.6
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-38 164.5 91 89.0
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-36 157.5 91 87.9
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 2.4e-35 153.7 111 73.9
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 4.1e-35 152.9 157 58.0
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 3.5e-34 149.8 195 52.3
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.0e-33 148.3 94 77.7
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 2.3e-33 147.1 80 91.2
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-32 144.4 151 57.6
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 2.5e-32 143.7 79 89.9
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 1.2e-31 141.4 78 88.5
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 2.3e-30 137.1 120 65.0
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 2.3e-30 137.1 120 65.0
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 8.9e-30 135.2 72 91.7
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 2.0e-29 134.0 84 77.4
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.4e-29 133.3 67 98.5
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 7.5e-29 132.1 73 87.7
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 2.9e-28 130.2 91 78.0
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.7e-28 129.8 63 100.0
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 6.4e-28 129.0 70 90.0
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 2.4e-27 127.1 72 83.3
MD15G1429600 Malus domestica HOM05D006604 ORTHO05D007974 3.5e-26 123.2 81 80.2
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 3.3e-24 116.7 141 51.8
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 5.6e-24 115.9 57 100.0
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 5.6e-24 115.9 159 47.2
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 1.2e-23 114.8 74 81.1
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.6e-23 114.4 62 88.7
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 8.1e-23 112.1 100 63.0
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 1.4e-22 111.3 72 79.2
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 5.2e-22 109.4 61 88.5
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 1.2e-21 108.2 103 62.1
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-19 101.7 87 65.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.9e-19 100.9 123 49.6
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 4.6e-18 96.3 53 86.8
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 7.8e-18 95.5 57 77.2
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 1.3e-17 94.7 57 77.2
Mapoly1449s0001 Marchantia polymorpha HOM05D006604 ORTHO05D007974 1.3e-17 94.7 179 32.4
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 2.3e-17 94.0 69 69.6
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 2.3e-17 94.0 60 76.7
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 6.9e-14 82.4 46 84.8
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 3.4e-13 80.1 59 72.9
SHI37140 Sapria himalayana HOM05D006604 ORTHO05D007974 9.9e-13 78.6 45 80.0
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 3.8e-12 76.6 56 76.8
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 4.9e-12 76.3 45 86.7
SHI36463 Sapria himalayana HOM05D006604 ORTHO05D007974 1.9e-11 74.3 43 81.4
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 3.2e-11 73.6 46 78.3
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 7.1e-11 72.4 173 32.9
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 1.2e-10 71.6 48 72.9
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 7.8e-10 68.9 40 77.5
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 7.8e-10 68.9 44 77.3
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 1.0e-09 68.6 148 36.5
SHI36366 Sapria himalayana HOM05D006604 ORTHO05D007974 1.9e-08 64.3 32 96.9
SHI31173 Sapria himalayana HOM05D006604 ORTHO05D007974 4.3e-08 63.2 168 33.3
ClCG06G014670 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.3e-07 61.6 36 86.1
ClCG07G016010 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.3e-07 61.6 33 87.9
Medtr0248s0030 Medicago truncatula HOM05D006604 ORTHO05D007974 1.6e-07 61.2 34 91.2
SHI12053 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-07 60.5 42 76.2
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 3.6e-07 60.1 38 81.6
SHI36696 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-07 59.3 28 100.0
SHI37563 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-07 59.3 30 93.3
SHI50563 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-07 59.3 28 100.0
ECA003G0002 Erigeron canadensis HOM05D006604 ORTHO05D007974 5.3e-06 56.2 36 80.6
Sabra04G0097400 Salix brachista HOM05D005794 ORTHO05D006814 5.3e-06 56.2 48 60.4
SabraMtG0005200 Salix brachista HOM05D005794 ORTHO05D006814 5.3e-06 56.2 48 60.4


User provided reference genes

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