Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10077 Nelumbo nucifera HOM05D007877 ORTHO05D009957 1.5e-26 122.1 63 100.0
Nn1g10099 Nelumbo nucifera HOM05D007877 ORTHO05D009957 1.5e-26 122.1 63 100.0
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.5e-26 122.1 63 100.0
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 2.2e-25 118.2 63 98.4
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 1.1e-24 115.9 63 96.8
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 1.1e-24 115.9 63 96.8
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 1.1e-24 115.9 63 96.8
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 1.1e-24 115.9 63 96.8
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 7.1e-24 113.2 63 95.2
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 7.1e-24 113.2 63 95.2
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 7.1e-24 113.2 63 95.2
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 3.5e-23 110.9 61 95.1
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 3.5e-23 110.9 61 95.1
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 3.5e-23 110.9 61 95.1
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 3.5e-23 110.9 61 95.1
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.5e-23 110.9 63 93.7
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.5e-23 110.9 63 93.7
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.5e-23 110.9 63 93.7
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.5e-23 110.9 63 93.7
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.0e-22 109.4 61 93.4
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 1.8e-22 108.6 62 90.3
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 1.8e-22 108.6 62 90.3
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 1.8e-22 108.6 61 93.4
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 1.8e-22 108.6 62 90.3
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 2.3e-22 108.2 62 90.3
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 3.0e-22 107.8 62 90.3
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 3.9e-22 107.5 63 90.5
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 5.1e-22 107.1 62 88.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.5e-21 105.5 61 90.2
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 4.3e-21 104.0 62 87.1
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 2.1e-20 101.7 63 85.7
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 2.1e-20 101.7 63 85.7
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 2.1e-20 101.7 63 85.7
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 2.1e-20 101.7 63 85.7
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 2.1e-20 101.7 63 85.7
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 1.1e-19 99.4 63 84.1
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 1.1e-19 99.4 63 84.1
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.1e-19 97.8 63 82.5
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 3.4e-18 94.4 63 81.0
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 1.4e-16 89.0 63 82.5
unitig_87.g27972 Utricularia gibba HOM05D007877 ORTHO05D009957 2.1e-15 85.1 51 82.4
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 2.7e-15 84.7 51 84.3
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.7e-15 84.7 55 81.8
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.7e-15 84.7 63 74.6
BolC6t36215H Brassica oleracea HOM05D007877 ORTHO05D009957 6.7e-14 80.1 60 73.3
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 1.1e-13 79.3 45 93.3
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 1.1e-13 79.3 45 93.3
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 2.5e-13 78.2 45 93.3
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 7.4e-13 76.6 45 91.1
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 7.4e-13 76.6 45 91.1
Peaxi162Scf00931g00018 Petunia axillaris HOM05D007877 ORTHO05D009957 4.8e-12 73.9 44 90.9
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 2.4e-11 71.6 45 88.9
Psat0s552g0160 Pisum sativum HOM05D007877 ORTHO05D009957 5.3e-11 70.5 45 80.0
ClCG05G014110 Citrullus lanatus HOM05D007877 ORTHO05D009957 2.6e-10 68.2 45 80.0
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 1.3e-09 65.9 37 91.9
Nitab4.5_0001681g0060 Nicotiana tabacum HOM05D007877 ORTHO05D009957 8.5e-09 63.2 53 67.9
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 8.5e-09 63.2 53 66.0
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 1.1e-08 62.8 46 73.9
C09p31620 Brassica napus HOM05D007877 ORTHO05D009957 2.5e-08 61.6 38 84.2
BraSC77t46652Z Brassica rapa HOM05D007877 ORTHO05D009957 9.4e-08 59.7 35 88.6
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 9.4e-08 59.7 39 79.5
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 4.6e-07 57.4 44 70.5
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 1.0e-06 56.2 44 68.2
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 1.8e-06 55.5 33 87.9
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 2.3e-06 55.1 44 65.9
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 2.3e-06 55.1 35 82.9
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 5.1e-06 53.9 44 65.9


User provided reference genes

Program Settings