Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10032 Nelumbo nucifera HOM05D008696 ORTHO05D010514 2.8e-28 127.9 62 100.0
Nn1g10035 Nelumbo nucifera HOM05D008696 ORTHO05D010514 1.4e-27 125.6 60 100.0
Solyc00g094520.1 Solanum lycopersicum HOM05D008696 ORTHO05D010514 8.9e-27 122.9 62 95.2
PGSC0003DMG400005437 Solanum tuberosum HOM05D008696 ORTHO05D010514 8.9e-27 122.9 62 95.2
Lsat_1_v5_gn_5_16440 Lactuca sativa HOM05D008696 ORTHO05D010514 1.5e-26 122.1 62 95.2
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 7.5e-26 119.8 58 98.3
arahy.Tifrunner.gnm1.ann1.AT0FGT Arachis hypogaea HOM05D008696 ORTHO05D010514 2.2e-25 118.2 58 98.3
arahy.Tifrunner.gnm1.ann1.D6INMV Arachis hypogaea HOM05D008696 ORTHO05D010514 2.2e-25 118.2 58 98.3
arahy.Tifrunner.gnm1.ann1.FXV2QT Arachis hypogaea HOM05D008696 ORTHO05D010514 2.2e-25 118.2 58 98.3
arahy.Tifrunner.gnm1.ann1.P4RH3S Arachis hypogaea HOM05D008696 ORTHO05D010514 2.2e-25 118.2 58 98.3
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 1.6e-23 112.1 57 94.7
Sp3g25810 Schrenkiella parvula HOM05D008696 ORTHO05D010514 2.0e-23 111.7 54 100.0
TPR.G36008 Trifolium pratense HOM05D008696 ORTHO05D010514 3.5e-23 110.9 56 96.4
Nitab4.5_0008578g0070 Nicotiana tabacum HOM05D008696 ORTHO05D002807 4.6e-23 110.5 62 85.5
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 4.6e-23 110.5 61 88.5
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 7.8e-23 109.8 57 93.0
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 1.3e-22 109.0 55 96.4
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 2.3e-22 108.2 53 98.1
arahy.Tifrunner.gnm1.ann1.QR678R Arachis hypogaea HOM05D008696 ORTHO05D010514 5.0e-22 107.1 57 89.5
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 5.0e-22 107.1 57 91.2
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 4.3e-21 104.0 53 94.3
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 9.5e-21 102.8 51 98.0
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 1.6e-20 102.1 56 89.3
SHI37562 Sapria himalayana HOM05D008696 ORTHO05D010514 1.8e-19 98.6 51 92.2
SHI36364 Sapria himalayana HOM05D012027 ORTHO05D010514 2.9e-17 91.3 49 89.8
Nitab4.5_0007237g0040 Nicotiana tabacum HOM05D008696 ORTHO05D010514 2.4e-16 88.2 55 80.0
Nitab4.5_0000307g0370 Nicotiana tabacum HOM05D008696 ORTHO05D010514 5.4e-16 87.0 55 80.0
Nitab4.5_0000886g0240 Nicotiana tabacum HOM05D008696 ORTHO05D010514 2.7e-15 84.7 53 77.4
Lsat_1_v5_gn_5_60661 Lactuca sativa HOM05D008696 ORTHO05D010514 5.6e-13 77.0 55 69.1
Nn1g09944 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.6e-13 77.0 42 88.1
Nn1g10158 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.6e-13 77.0 42 88.1
Nn1g10186 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.6e-13 77.0 42 88.1
TPR.G38982 Trifolium pratense HOM05D008696 ORTHO05D010514 9.5e-13 76.3 57 71.9
Nitab4.5_0004100g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 8.1e-12 73.2 49 71.4
SHI36694 Sapria himalayana HOM05D008696 ORTHO05D010514 3.1e-11 71.2 37 91.9
Lsat_1_v5_gn_0_34861 Lactuca sativa HOM05D008696 ORTHO05D010514 4.0e-11 70.9 35 94.3
Nitab4.5_0000172g0780 Nicotiana tabacum HOM05D008696 ORTHO05D010514 7.5e-10 66.6 40 82.5
GSVIVG01006665001 Vitis vinifera HOM05D008696 ORTHO05D010514 2.4e-08 61.6 28 100.0
SHI35932 Sapria himalayana HOM05D008696 ORTHO05D010514 1.6e-07 58.9 35 82.9
SHI46655 Sapria himalayana HOM05D008696 ORTHO05D010514 8.6e-06 53.1 26 92.3


User provided reference genes

Program Settings