Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.4e-71 271.6 135 100.0
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.5e-68 261.5 129 100.0
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 7.3e-66 253.8 135 94.8
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 7.3e-66 253.8 135 94.8
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 3.6e-65 251.5 135 94.8
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 3.6e-65 251.5 129 96.1
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 4.7e-65 251.1 133 94.7
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 8.0e-65 250.4 134 94.0
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 2.3e-64 248.8 133 94.0
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 2.3e-64 248.8 133 94.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 3.0e-64 248.4 133 94.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 3.0e-64 248.4 133 94.0
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.0e-64 248.4 135 94.1
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 3.0e-64 248.4 135 94.1
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 4.4e-63 244.6 129 95.3
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 5.7e-63 244.2 132 92.4
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.7e-63 244.2 132 93.9
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.7e-63 244.2 132 93.9
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 7.5e-63 243.8 135 91.9
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 9.8e-63 243.4 135 92.6
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 1.7e-62 242.7 132 92.4
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 3.7e-62 241.5 133 91.7
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 1.1e-61 240.0 135 91.1
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 4.1e-61 238.0 135 90.4
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 4.6e-60 234.6 129 92.2
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.9e-59 231.5 135 88.1
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.9e-59 231.5 135 88.1
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 3.9e-59 231.5 135 88.1
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 6.6e-59 230.7 131 89.3
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 1.1e-58 229.9 129 90.7
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.1e-58 229.9 127 91.3
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.1e-58 229.9 127 91.3
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 1.2e-57 226.5 134 84.3
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.1e-57 225.7 132 87.9
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.8e-57 225.3 133 84.2
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.8e-57 225.3 133 84.2
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 5.8e-55 217.6 129 86.8
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 9.8e-55 216.9 132 83.3
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.9e-54 215.3 129 85.3
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.6e-52 209.5 129 83.7
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.1e-50 203.4 127 83.5
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 1.9e-50 202.6 104 98.1
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.9e-46 188.7 133 74.4
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.3e-43 179.9 109 86.2
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 2.3e-43 179.1 96 95.8
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 6.2e-41 171.0 100 89.0
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 8.1e-41 170.6 98 88.8
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 8.1e-41 170.6 114 76.3
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 2.6e-39 165.6 103 83.5
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 1.7e-35 152.9 84 90.5
TPR.G18511 Trifolium pratense HOM05D003666 ORTHO05D004770 2.3e-35 152.5 86 88.4
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 3.9e-35 151.8 81 95.1
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 7.3e-34 147.5 84 90.5
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 3.1e-32 142.1 84 86.9
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 2.6e-31 139.0 94 79.8
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 1.1e-29 133.7 89 79.8
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 5.4e-29 131.3 92 80.4
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.1e-25 119.4 71 84.5
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 2.6e-23 112.5 128 46.9
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 5.8e-23 111.3 133 51.1
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 2.9e-22 109.0 65 83.1
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 1.8e-19 99.8 55 89.1
Peaxi162Scf00147g00311 Petunia axillaris HOM05D003666 ORTHO05D004770 3.0e-19 99.0 55 89.1
MELO3C030345.2 Cucumis melo HOM05D003666 ORTHO05D004770 9.6e-18 94.0 55 89.1
Lalb_Chr00c54g0413571 Lupinus albus HOM05D003666 ORTHO05D004770 9.0e-16 87.4 48 87.5
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.0e-15 86.3 53 79.2
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 7.6e-15 84.3 128 36.7
Oeu022812.1 Olea europaea HOM05D003666 ORTHO05D004770 1.9e-13 79.7 71 66.2
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 2.4e-13 79.3 40 90.0
SEGI_03857 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 3.5e-12 75.5 50 74.0
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 5.3e-08 61.6 100 37.0
SHI01159 Sapria himalayana HOM05D003666 ORTHO05D004770 1.2e-07 60.5 55 58.2
Solyc10g045765.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.9e-06 55.8 35 68.6


User provided reference genes

Program Settings