Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 5.2e-93 344.4 171 100.0
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 1.7e-72 276.2 154 85.7
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.3e-71 271.9 152 86.2
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.1e-69 265.4 188 72.9
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 8.9e-69 263.8 153 83.0
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 8.9e-69 263.8 153 81.7
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 1.5e-68 263.1 161 80.1
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.5e-68 263.1 171 77.2
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.0e-68 262.7 171 77.2
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.6e-68 262.3 159 78.0
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 3.4e-68 261.9 162 77.2
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.4e-68 261.9 162 77.2
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 4.4e-68 261.5 152 82.9
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 5.8e-68 261.2 155 80.0
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.3e-67 260.0 158 77.2
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.2e-67 259.2 163 77.9
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 2.9e-67 258.8 152 80.9
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 3.7e-67 258.5 172 75.6
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 6.4e-67 257.7 159 76.1
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 8.3e-67 257.3 163 76.7
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.4e-66 256.5 155 80.0
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.9e-66 256.1 153 79.1
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 4.1e-66 255.0 153 79.7
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 5.4e-66 254.6 153 81.0
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 9.2e-66 253.8 164 76.8
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.2e-65 253.4 160 78.1
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.5e-65 251.9 163 75.5
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 4.6e-65 251.5 160 77.5
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 6.0e-65 251.1 153 79.7
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.0e-64 250.4 155 78.1
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.3e-64 250.0 153 80.4
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.3e-64 250.0 155 76.8
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 3.0e-64 248.8 172 71.5
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.0e-64 248.8 153 75.8
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 3.0e-64 248.8 167 74.9
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 5.0e-64 248.1 153 75.2
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 6.6e-64 247.7 166 74.1
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 6.6e-64 247.7 172 72.7
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 8.6e-64 247.3 153 77.1
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 8.6e-64 247.3 158 77.2
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.9e-63 246.1 166 74.7
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.9e-63 246.1 153 75.2
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 1.9e-63 246.1 207 63.3
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 2.5e-63 245.7 162 75.3
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 5.6e-63 244.6 155 74.2
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 9.5e-63 243.8 157 75.8
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.2e-62 243.4 155 74.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.6e-62 243.0 160 73.1
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.6e-62 243.0 155 74.2
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.6e-62 243.0 155 73.5
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.1e-62 242.7 153 77.8
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 4.7e-62 241.5 155 73.5
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 6.2e-62 241.1 166 73.5
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 6.2e-62 241.1 155 73.5
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.0e-62 240.7 166 72.9
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.1e-61 240.4 159 74.8
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.8e-61 239.6 150 76.0
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.1e-61 238.8 166 72.3
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 8.9e-61 237.3 153 75.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.9e-61 237.3 176 68.8
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 8.9e-61 237.3 176 68.8
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.2e-60 236.9 151 75.5
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 3.4e-60 235.3 153 76.5
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 5.8e-60 234.6 153 75.2
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.5e-60 234.2 153 73.2
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.5e-60 234.2 166 70.5
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 7.5e-60 234.2 153 76.5
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 7.5e-60 234.2 153 75.8
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.3e-59 233.4 155 74.2
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.3e-59 233.4 155 74.2
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 1.7e-59 233.0 152 72.4
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.7e-59 233.0 163 71.8
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.7e-59 233.0 153 73.2
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.7e-59 231.9 162 71.6
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 4.9e-59 231.5 155 72.9
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 4.9e-59 231.5 153 72.5
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 4.9e-59 231.5 155 72.9
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 6.4e-59 231.1 236 54.2
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 3.2e-58 228.8 151 74.2
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 2.1e-57 226.1 157 71.3
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 2.1e-57 226.1 152 73.7
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.7e-57 225.7 179 63.7
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.3e-56 223.4 158 68.4
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 3.3e-55 218.8 176 65.3
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.3e-53 212.6 150 66.7
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 1.5e-52 209.9 151 67.5
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 4.4e-52 208.4 133 78.2
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.2e-51 206.1 162 65.4
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 2.3e-48 196.1 115 78.3
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.9e-47 193.0 165 62.4
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 4.3e-47 191.8 114 80.7
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 9.6e-47 190.7 113 80.5
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 8.1e-46 187.6 119 74.8
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.0e-45 185.3 113 78.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.9e-45 184.1 152 65.1
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-40 170.6 108 76.9
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 2.8e-38 162.5 110 72.7
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 3.1e-37 159.1 89 83.1
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 5.8e-36 154.8 90 81.1
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 5.3e-29 131.7 153 46.4
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 6.0e-25 118.2 75 76.0
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.2e-18 95.5 81 67.9
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 5.5e-18 95.1 98 52.0
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 4.8e-14 82.0 90 53.3
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 5.8e-12 75.1 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.5e-10 69.7 63 55.6


User provided reference genes

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