Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 1.9e-37 158.7 81 100.0
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 1.1e-29 132.9 78 83.3
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 3.3e-29 131.3 77 83.1
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 9.5e-29 129.8 78 80.8
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 2.8e-28 128.3 78 82.1
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 3.6e-28 127.9 78 78.2
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 4.7e-28 127.5 78 79.5
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 6.1e-28 127.1 77 79.2
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 8.0e-28 126.7 78 79.5
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 5.2e-27 124.0 78 76.9
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 6.8e-27 123.6 77 77.9
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 6.8e-27 123.6 78 76.9
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 8.9e-27 123.2 78 73.1
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 1.5e-26 122.5 78 78.2
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 2.0e-26 122.1 73 79.5
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 2.6e-26 121.7 78 76.9
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 5.7e-26 120.6 78 78.2
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 7.5e-26 120.2 78 74.4
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 9.8e-26 119.8 78 76.9
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 9.8e-26 119.8 78 76.9
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 9.8e-26 119.8 78 73.1
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.3e-25 119.4 77 75.3
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 1.7e-25 119.0 78 75.6
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 1.7e-25 119.0 78 76.9
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 2.9e-25 118.2 78 74.4
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 2.9e-25 118.2 78 74.4
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 2.9e-25 118.2 78 71.8
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 4.9e-25 117.5 78 73.1
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 8.3e-25 116.7 77 71.4
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 8.3e-25 116.7 77 74.0
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 75.6
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 75.6
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 1.1e-24 116.3 77 75.3
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 3.2e-24 114.8 77 74.0
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 3.2e-24 114.8 82 73.2
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 4.1e-24 114.4 77 68.8
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 4.1e-24 114.4 78 71.8
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 5.4e-24 114.0 78 74.4
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 5.4e-24 114.0 78 67.9
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.4e-24 114.0 79 74.7
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 5.4e-24 114.0 79 74.7
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 5.4e-24 114.0 78 73.1
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 9.2e-24 113.2 78 71.8
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 9.2e-24 113.2 78 71.8
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 9.2e-24 113.2 78 71.8
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 9.2e-24 113.2 79 74.7
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 1.2e-23 112.8 78 73.1
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 1.2e-23 112.8 86 73.3
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.6e-23 112.5 79 72.2
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 1.6e-23 112.5 77 71.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 2.0e-23 112.1 78 70.5
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.0e-23 112.1 79 72.2
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.6e-23 110.9 79 70.9
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.6e-23 110.9 79 70.9
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.6e-23 110.9 79 74.7
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 5.9e-23 110.5 79 72.2
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 7.8e-23 110.2 77 70.1
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 1.0e-22 109.8 79 70.9
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.3e-22 109.4 80 71.2
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 1.3e-22 109.4 79 72.2
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-22 108.6 79 69.6
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-22 108.6 79 69.6
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-22 108.6 79 69.6
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.3e-22 108.6 79 72.2
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 3.0e-22 108.2 78 67.9
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 3.0e-22 108.2 79 69.6
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 3.9e-22 107.8 78 73.1
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.9e-22 107.8 79 69.6
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 6.6e-22 107.1 79 69.6
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.5e-21 105.9 89 64.0
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 1.9e-21 105.5 79 67.1
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.5e-21 105.1 79 68.4
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 4.3e-21 104.4 82 67.1
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 5.6e-21 104.0 80 66.2
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 7.3e-21 103.6 80 65.0
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 9.5e-21 103.2 82 68.3
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 2.1e-20 102.1 76 69.7
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 2.1e-20 102.1 79 67.1
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 2.8e-20 101.7 82 68.3
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 2.8e-20 101.7 80 68.8
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 3.6e-20 101.3 82 68.3
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 1.4e-19 99.4 78 62.8
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 1.8e-19 99.0 77 68.8
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 3.1e-19 98.2 63 74.6
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 4.0e-19 97.8 79 65.8
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 4.0e-19 97.8 63 76.2
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.0e-19 97.8 71 70.4
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.4e-17 90.5 81 59.3
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.4e-17 90.5 81 59.3
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 1.4e-16 89.4 88 54.5
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 1.4e-16 89.4 89 56.2
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 3.2e-16 88.2 88 55.7
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 4.1e-16 87.8 89 58.4
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 5.4e-16 87.4 95 53.7
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 2.0e-15 85.5 65 67.7
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 1.3e-14 82.8 78 61.5
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 1.4e-11 72.8 85 50.6
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 3.1e-11 71.6 82 52.4
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.4e-09 63.9 46 69.6
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 3.2e-08 61.6 79 49.4
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 4.1e-08 61.2 83 44.6
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 1.7e-06 55.8 49 61.2


User provided reference genes

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