Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 3.1e-96 355.1 181 100.0
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.0e-62 243.8 168 74.4
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 3.5e-55 218.8 172 64.5
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.7e-54 216.5 172 61.6
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 9.4e-53 210.7 171 60.2
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 8.0e-52 207.6 171 59.6
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 1.1e-48 197.2 174 58.0
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.1e-48 197.2 171 57.3
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 3.5e-47 192.2 170 58.8
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 4.5e-47 191.8 170 58.2
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 4.5e-47 191.8 168 56.0
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 5.9e-47 191.4 170 53.5
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 7.7e-47 191.0 172 55.2
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 2.3e-46 189.5 168 55.4
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 2.9e-46 189.1 170 58.2
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 3.8e-46 188.7 171 57.9
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 5.0e-46 188.3 169 55.0
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 6.6e-46 188.0 171 53.2
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 6.6e-46 188.0 170 55.3
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 1.9e-45 186.4 170 56.5
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.9e-45 186.4 168 54.8
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 2.5e-45 186.0 172 57.0
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 5.5e-45 184.9 170 52.9
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 9.5e-45 184.1 170 52.4
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.2e-44 183.7 173 52.0
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 1.6e-44 183.3 170 56.5
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 2.8e-44 182.6 170 55.3
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.6e-44 182.2 174 54.0
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 6.1e-44 181.4 170 52.4
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 8.0e-44 181.0 169 53.3
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 8.0e-44 181.0 169 53.3
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.0e-43 180.6 174 52.9
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.8e-43 179.9 170 51.8
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.8e-43 179.9 169 53.8
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 2.3e-43 179.5 169 52.7
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 2.3e-43 179.5 169 52.7
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 2.3e-43 179.5 169 52.7
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 4.0e-43 178.7 169 52.1
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 4.0e-43 178.7 168 53.6
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 4.0e-43 178.7 169 53.3
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 5.2e-43 178.3 169 52.1
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 1.5e-42 176.8 168 54.2
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.6e-42 176.0 169 53.8
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.6e-42 176.0 169 54.4
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 2.6e-42 176.0 169 54.4
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 9.8e-42 174.1 157 57.3
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 1.3e-41 173.7 170 51.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.2e-41 172.9 168 52.4
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 4.9e-41 171.8 170 50.0
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 6.3e-41 171.4 172 52.3
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.4e-40 170.2 168 48.2
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.8e-40 169.9 181 51.4
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.8e-40 169.9 169 50.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 4.1e-40 168.7 157 53.5
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 4.1e-40 168.7 168 50.0
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 9.2e-40 167.5 157 53.5
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 1.2e-39 167.2 174 52.3
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.2e-39 167.2 167 55.1
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 2.0e-39 166.4 167 52.1
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 2.7e-39 166.0 168 51.2
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 3.5e-39 165.6 165 52.1
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 4.5e-39 165.2 169 50.3
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.5e-39 165.2 169 50.3
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 5.9e-39 164.9 168 51.2
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.0e-38 164.1 161 54.7
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.0e-38 164.1 169 50.3
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 1.3e-38 163.7 168 50.6
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 5.0e-38 161.8 142 53.5
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 5.0e-38 161.8 174 48.9
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 8.6e-38 161.0 174 48.9
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 1.1e-37 160.6 159 51.6
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 1.9e-37 159.8 170 50.0
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 2.5e-37 159.5 171 48.0
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.2e-36 157.1 170 47.6
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 1.6e-36 156.8 171 48.0
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 3.6e-36 155.6 168 47.6
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 8.0e-36 154.5 168 49.4
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.3e-35 152.9 146 52.7
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 8.9e-35 151.0 166 47.0
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 1.5e-34 150.2 167 46.7
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.0e-34 149.8 139 51.8
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 7.5e-34 147.9 168 45.8
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.7e-33 146.7 169 46.7
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 4.9e-33 145.2 168 47.0
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 8.3e-33 144.4 169 47.9
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 9.2e-32 141.0 170 44.7
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.0e-30 137.5 130 56.9
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 7.3e-29 131.3 168 44.0
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 9.5e-29 131.0 167 46.1
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 2.1e-28 129.8 168 44.0
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.6e-28 129.0 169 43.2
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 3.5e-23 112.5 170 42.4
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 5.1e-22 108.6 147 41.5
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.5e-21 107.1 122 45.1
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 8.1e-20 101.3 156 39.7
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 4.4e-18 95.5 122 44.3
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.1e-16 90.9 136 38.2
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 7.8e-15 84.7 134 38.8
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 7.3e-13 78.2 178 30.3
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 7.3e-13 78.2 139 35.3
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 6.8e-11 71.6 62 56.5
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 3.4e-10 69.3 183 29.5
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 9.9e-10 67.8 88 44.3
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 7.1e-08 61.6 71 50.7


User provided reference genes

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