Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 5.1e-66 254.2 124 100.0
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 3.9e-34 148.3 113 72.6
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 9.4e-20 100.5 114 53.5
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 6.1e-19 97.8 114 51.8
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 3.8e-13 78.6 103 46.6
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 6.5e-13 77.8 101 46.5
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 1.1e-12 77.0 87 50.6
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 1.9e-12 76.3 85 51.8
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 9.4e-12 73.9 78 51.3
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 3.6e-11 72.0 93 46.2
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 4.7e-11 71.6 89 46.1
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 6.1e-11 71.2 93 46.2
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 1.0e-10 70.5 78 53.8
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 2.3e-10 69.3 115 38.3
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 3.0e-10 68.9 91 41.8
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 5.2e-10 68.2 96 46.9
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 6.8e-10 67.8 89 47.2
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 8.8e-10 67.4 78 48.7
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.2e-09 67.0 93 43.0
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 2.0e-09 66.2 99 41.4
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 2.6e-09 65.9 95 37.9
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 3.4e-09 65.5 79 49.4
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 3.4e-09 65.5 69 50.7
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 1.3e-08 63.5 95 41.1
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 3.1e-07 58.9 95 41.1
SEGI_00596 Sequoiadendron giganteum HOM05D049705 ORTHO05D050944 3.1e-07 58.9 71 45.1
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 7.0e-07 57.8 100 40.0
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 9.2e-07 57.4 90 42.2
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 9.2e-07 57.4 61 45.9
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 1.2e-06 57.0 81 43.2
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.0e-06 56.2 97 36.1
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 2.7e-06 55.8 90 41.1
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 4.5e-06 55.1 101 38.6


User provided reference genes

Program Settings