Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.4e-34 149.1 77 100.0
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.6e-20 101.7 77 68.8
Nn1g09674 Nelumbo nucifera HOM05D006282 ORTHO05D007460 6.9e-13 77.0 84 57.1
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 6.9e-13 77.0 77 55.8
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 9.1e-13 76.6 77 50.6
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 3.4e-12 74.7 71 56.3
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.9e-12 73.9 74 45.9
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.2e-11 72.0 69 60.9
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.2e-11 72.0 69 60.9
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 2.2e-11 72.0 77 51.9
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.8e-11 71.2 69 59.4
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.1e-10 69.7 77 48.1
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.5e-10 68.6 58 60.3
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.5e-10 68.6 63 54.0
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 4.2e-10 67.8 76 46.1
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 4.2e-10 67.8 63 58.7
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 7.2e-10 67.0 65 55.4
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.2e-09 66.2 69 58.0
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.1e-09 65.5 77 48.1
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 2.1e-09 65.5 66 53.0
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 3.6e-09 64.7 52 55.8
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 4.6e-09 64.3 76 50.0
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 7.9e-09 63.5 73 50.7
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.8e-08 62.4 70 57.1
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 1.8e-08 62.4 67 50.7
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.3e-08 62.0 68 57.4
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-08 62.0 65 52.3
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 2.3e-08 62.0 82 52.4
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.0e-08 61.6 77 45.5
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.9e-08 61.2 76 43.4
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.9e-08 61.2 76 47.4
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 3.9e-08 61.2 79 49.4
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.9e-08 61.2 71 49.3
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.1e-08 60.8 76 44.7
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 5.1e-08 60.8 72 47.2
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 5.1e-08 60.8 77 44.2
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 8.8e-08 60.1 76 43.4
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.1e-07 59.7 77 45.5
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.1e-07 59.7 78 48.7
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.1e-07 59.7 77 45.5
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 1.5e-07 59.3 78 50.0
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.5e-07 59.3 77 49.4
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-07 58.9 77 49.4
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-07 58.9 68 54.4
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-07 58.9 69 56.5
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.0e-07 58.9 77 45.5
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.6e-07 58.5 76 48.7
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 2.6e-07 58.5 76 42.1
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.3e-07 58.2 74 50.0
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.3e-07 58.2 80 46.2
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 3.3e-07 58.2 76 42.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-07 57.8 77 50.6
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-07 57.8 65 50.8
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.7e-07 57.4 73 49.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.4e-07 57.0 74 48.6
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.4e-07 57.0 74 48.6
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.4e-07 57.0 81 44.4
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 9.7e-07 56.6 76 48.7
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.3e-06 56.2 78 46.2
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.7e-06 55.8 78 46.2
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-06 55.8 52 53.8
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.7e-06 55.8 84 45.2
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 2.2e-06 55.5 81 44.4
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-06 55.5 76 39.5
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 2.8e-06 55.1 78 44.9
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 2.8e-06 55.1 84 36.9
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 2.8e-06 55.1 74 45.9
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.8e-06 55.1 65 46.2
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.8e-06 54.3 68 52.9
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.8e-06 54.3 69 50.7
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-06 54.3 66 50.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-06 54.3 67 49.3
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.8e-06 54.3 71 46.5
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 8.2e-06 53.5 79 44.3


User provided reference genes

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