Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09507 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.2e-67 258.8 129 100.0
Nn8g40503 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.9e-49 197.6 123 83.7
Nn2g10474 Nelumbo nucifera HOM05D008814 ORTHO05D010812 5.5e-39 164.5 100 84.0
CAN.G960.18 Capsicum annuum HOM05D008814 ORTHO05D010812 1.5e-20 103.2 62 82.3
CAN.G1109.2 Capsicum annuum HOM05D008814 ORTHO05D010812 4.4e-20 101.7 62 80.6
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 4.4e-20 101.7 62 80.6
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 4.4e-20 101.7 62 80.6
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 4.4e-20 101.7 62 80.6
CAN.G1.21 Capsicum annuum HOM05D008814 ORTHO05D010812 1.3e-19 100.1 65 76.9
Solyc00g500343.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 2.9e-19 99.0 62 80.6
Solyc08g036500.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 2.9e-19 99.0 62 80.6
BcaC02g09030 Brassica carinata HOM05D008814 ORTHO05D010812 3.7e-19 98.6 62 77.4
A04p09340 Brassica napus HOM05D008814 ORTHO05D010812 3.7e-19 98.6 62 77.4
BolSC28t60310H Brassica oleracea HOM05D008814 ORTHO05D010812 3.7e-19 98.6 62 77.4
BolSC28t60366H Brassica oleracea HOM05D008814 ORTHO05D010812 3.7e-19 98.6 62 77.4
BraSC48t46234Z Brassica rapa HOM05D008814 ORTHO05D010812 3.7e-19 98.6 62 77.4
BcaC09g49585 Brassica carinata HOM05D008814 ORTHO05D010812 1.1e-18 97.1 62 75.8
PGSC0003DMG400033609 Solanum tuberosum HOM05D008814 ORTHO05D010812 7.8e-17 90.9 62 74.2
GSVIVG01005452001 Vitis vinifera HOM05D008814 ORTHO05D010812 3.0e-16 89.0 52 80.8
C01p34810 Brassica napus HOM05D008814 ORTHO05D010812 8.6e-16 87.4 62 69.4
CsaV3_7G023800 Cucumis sativus L. HOM05D008814 ORTHO05D010812 8.6e-16 87.4 62 69.4
C01p34890 Brassica napus HOM05D008814 ORTHO05D010812 3.3e-15 85.5 62 67.7
Nitab4.5_0000172g1910 Nicotiana tabacum HOM05D008814 ORTHO05D010812 1.6e-14 83.2 62 64.5
Nitab4.5_0014940g0030 Nicotiana tabacum HOM05D008814 ORTHO05D010812 6.2e-14 81.3 60 70.0
ATR0987G010 Amborella trichopoda HOM05D008814 ORTHO05D010812 3.1e-13 79.0 57 77.2
MELO3C027941.2 Cucumis melo HOM05D008814 ORTHO05D010812 4.0e-13 78.6 57 68.4
Lj2P1215T12 Lonicera japonica HOM05D008814 ORTHO05D010812 6.8e-13 77.8 52 73.1
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 2.0e-12 76.3 47 76.6
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 3.4e-12 75.5 51 74.5
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 3.4e-12 75.5 45 77.8
SHI04841 Sapria himalayana HOM05D008814 ORTHO05D010812 1.7e-11 73.2 57 64.9
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.1e-10 70.5 42 76.2
Nn1g04064 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.1e-10 70.5 41 87.8
Nitab4.5_0000478g0040 Nicotiana tabacum HOM05D008814 ORTHO05D010812 7.8e-09 64.3 55 63.6
Sopen05g009620 Solanum pennellii HOM05D008814 ORTHO05D010812 8.6e-08 60.8 67 50.7
MELO3C013036.2 Cucumis melo HOM05D008814 ORTHO05D010812 5.6e-07 58.2 44 65.9
BcaC02g09031 Brassica carinata HOM05D008814 ORTHO05D010812 9.5e-07 57.4 91 40.7
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 3.6e-06 55.5 45 64.4


User provided reference genes

Program Settings