Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09446 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.4e-56 222.6 103 100.0
Nn1g09445 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.2e-46 188.7 102 84.3
Nn3g18575 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.5e-15 86.3 96 43.8
Nn5g28809 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.2e-14 82.4 96 41.7
Nn3g18117 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.1e-13 80.1 93 38.7
Nn3g18120 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.4e-13 79.7 94 39.4
TAR629G0853 Trochodendron aralioides HOM05D000535 ORTHO05D000427 3.2e-13 78.6 92 41.3
Nn2g13123 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.2e-12 76.6 93 40.9
Nn4g23055 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.2e-12 76.6 94 39.4
Nn4g23054 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.6e-12 76.3 94 39.4
Nn3g18116 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.1e-12 75.9 94 39.4
Nn3g18980 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.1e-12 75.9 93 37.6
Nn6g34814 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.7e-12 75.5 93 37.6
Nn3g18118 Nelumbo nucifera HOM05D000535 ORTHO05D000427 4.6e-12 74.7 94 39.4
Nn5g28810 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.7e-11 72.8 81 42.0
MBI03_g13457_MAGBIO Magnolia biondii HOM05D000535 ORTHO05D000427 1.6e-09 66.2 95 38.9
Dinv08278 Davidia involucrata HOM05D000535 ORTHO05D000427 2.8e-09 65.5 74 45.9
Cc04_g08410 Coffea canephora HOM05D000535 ORTHO05D000427 8.1e-09 63.9 92 42.4
HanXRQChr06g0165011 Helianthus annuus HOM05D000535 ORTHO05D000427 8.1e-09 63.9 89 37.1
HanXRQChr17g0550521 Helianthus annuus HOM05D000535 ORTHO05D000427 8.1e-09 63.9 87 37.9
FAN18G1447 Fragaria x ananassa HOM05D002264 ORTHO05D000427 1.1e-08 63.5 93 35.5
HanXRQChr06g0164731 Helianthus annuus HOM05D000535 ORTHO05D000427 1.1e-08 63.5 90 37.8
Oeu029073.1 Olea europaea HOM05D000535 ORTHO05D000427 1.1e-08 63.5 70 42.9
FvH4_5g18500 Fragaria vesca HOM05D000535 ORTHO05D000427 1.4e-08 63.2 93 35.5
Lj2g0003621 Lotus japonicus HOM05D000535 ORTHO05D000427 1.8e-08 62.8 63 46.0
FvH4_5g18510 Fragaria vesca HOM05D000535 ORTHO05D000427 2.4e-08 62.4 92 35.9
Oeu029075.1 Olea europaea HOM05D000535 ORTHO05D000427 2.4e-08 62.4 71 40.8
HanXRQChr06g0164761 Helianthus annuus HOM05D000535 ORTHO05D000427 3.1e-08 62.0 87 37.9
HanXRQChr06g0164791 Helianthus annuus HOM05D000535 ORTHO05D000427 3.1e-08 62.0 87 37.9
Solyc04g150105.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 3.1e-08 62.0 73 38.4
HanXRQChr06g0164771 Helianthus annuus HOM05D000535 ORTHO05D000427 4.0e-08 61.6 87 36.8
DCAR_026808 Daucus carota HOM05D000535 ORTHO05D000427 5.3e-08 61.2 76 40.8
HanXRQChr06g0164741 Helianthus annuus HOM05D000535 ORTHO05D000427 5.3e-08 61.2 87 37.9
Lj2P607T10 Lonicera japonica HOM05D000535 ORTHO05D000427 5.3e-08 61.2 72 41.7
Sopen03g029420 Solanum pennellii HOM05D000535 ORTHO05D014685 5.3e-08 61.2 94 36.2
DCAR_023555 Daucus carota HOM05D000535 ORTHO05D000427 6.9e-08 60.8 70 45.7
FAN08G0118 Fragaria x ananassa HOM05D000535 ORTHO05D000427 6.9e-08 60.8 92 32.6
FAN13G2343 Fragaria x ananassa HOM05D000535 ORTHO05D000427 6.9e-08 60.8 92 34.8
PGSC0003DMG400029534 Solanum tuberosum HOM05D000535 ORTHO05D000427 6.9e-08 60.8 73 39.7
TWI32G0636 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 6.9e-08 60.8 92 35.9
TWI32G1004 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 6.9e-08 60.8 93 34.4
HanXRQChr06g0165021 Helianthus annuus HOM05D000535 ORTHO05D000427 9.0e-08 60.5 75 41.3
Nitab4.5_0012105g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 9.0e-08 60.5 74 39.2
Oeu018758.1 Olea europaea HOM05D000535 ORTHO05D000427 9.0e-08 60.5 76 40.8
HanXRQChr06g0165041 Helianthus annuus HOM05D000535 ORTHO05D000427 1.2e-07 60.1 75 40.0
Lju170C15T10 Lonicera japonica HOM05D000535 ORTHO05D000427 1.2e-07 60.1 71 43.7
Potri.004G067600 Populus trichocarpa HOM05D000535 ORTHO05D000427 1.2e-07 60.1 85 35.3
SalBow3G2587 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.2e-07 60.1 66 45.5
PGSC0003DMG400010136 Solanum tuberosum HOM05D000535 ORTHO05D014685 1.2e-07 60.1 73 39.7
PGSC0003DMG400010144 Solanum tuberosum HOM05D000535 ORTHO05D014685 1.2e-07 60.1 73 39.7
VMungo0464G1443 Vigna mungo HOM05D000535 ORTHO05D000427 1.2e-07 60.1 84 36.9
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 1.5e-07 59.7 71 42.3
Lju170C18T0 Lonicera japonica HOM05D000535 ORTHO05D000427 1.5e-07 59.7 71 42.3
PSO782G5179 Papaver somniferum HOM05D000535 ORTHO05D000427 1.5e-07 59.7 71 43.7
PGSC0003DMG400010141 Solanum tuberosum HOM05D000535 ORTHO05D014685 1.5e-07 59.7 73 39.7
HanXRQChr06g0165031 Helianthus annuus HOM05D000535 ORTHO05D000427 2.0e-07 59.3 80 41.2
PGSC0003DMG400027054 Solanum tuberosum HOM05D000535 ORTHO05D000427 2.0e-07 59.3 92 39.1
HanXRQChr08g0211641 Helianthus annuus HOM05D000535 ORTHO05D000427 2.6e-07 58.9 84 35.7
CSS0038986 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 3.4e-07 58.5 68 44.1
FAN04G0905 Fragaria x ananassa HOM05D002264 ORTHO05D002413 3.4e-07 58.5 92 32.6
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 3.4e-07 58.5 68 44.1
Oeu020484.1 Olea europaea HOM05D000535 ORTHO05D000427 3.4e-07 58.5 71 39.4
PSO063G4340 Papaver somniferum HOM05D000535 ORTHO05D000427 3.4e-07 58.5 71 43.7
Sc14g0008190 Simmondsia chinensis HOM05D000535 ORTHO05D000427 3.4e-07 58.5 68 44.1
Ah.03g135120 Amaranthus hybridus HOM05D000535 ORTHO05D000427 4.5e-07 58.2 86 41.9
MSTRG.11531 Avicennia marina HOM05D000535 ORTHO05D000427 4.5e-07 58.2 69 42.0
CAN.G861.39 Capsicum annuum HOM05D000535 ORTHO05D000427 4.5e-07 58.2 71 43.7
HanXRQChr08g0211621 Helianthus annuus HOM05D000535 ORTHO05D000427 4.5e-07 58.2 84 35.7
HanXRQChr08g0211631 Helianthus annuus HOM05D000535 ORTHO05D000427 4.5e-07 58.2 84 35.7
Nitab4.5_0000477g0200 Nicotiana tabacum HOM05D000535 ORTHO05D000427 4.5e-07 58.2 92 34.8
Potri.017G153400 Populus trichocarpa HOM05D000535 ORTHO05D000427 4.5e-07 58.2 62 43.5
Potri.017G153466 Populus trichocarpa HOM05D000535 ORTHO05D000427 4.5e-07 58.2 62 43.5
Potri.017G153600 Populus trichocarpa HOM05D000535 ORTHO05D000427 4.5e-07 58.2 62 43.5
Atru.chr10.1136 Acer truncatum HOM05D000535 ORTHO05D000427 5.8e-07 57.8 75 38.7
CSS0015346 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 5.8e-07 57.8 72 41.7
CSS0047130 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 5.8e-07 57.8 72 41.7
AUR62028778 Chenopodium quinoa HOM05D000535 ORTHO05D000427 5.8e-07 57.8 62 50.0
HanXRQChr08g0211661 Helianthus annuus HOM05D000535 ORTHO05D000427 5.8e-07 57.8 85 36.5
HanXRQChr08g0211891 Helianthus annuus HOM05D000535 ORTHO05D000427 5.8e-07 57.8 84 34.5
Lj9P411T41 Lonicera japonica HOM05D000535 ORTHO05D000427 5.8e-07 57.8 70 44.3
Oeu020485.1 Olea europaea HOM05D000535 ORTHO05D000427 5.8e-07 57.8 71 39.4
RcHm_v2.0_Chr7g0177011 Rosa chinensis HOM05D000535 ORTHO05D000427 5.8e-07 57.8 68 41.2
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 5.8e-07 57.8 65 41.5
Sabra04G0045300 Salix brachista HOM05D000535 ORTHO05D000427 7.6e-07 57.4 87 35.6
Solyc03g098710.1 Solanum lycopersicum HOM05D000535 ORTHO05D014685 7.6e-07 57.4 104 32.7
Solyc06g072230.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 7.6e-07 57.4 85 36.5
Aqoxy3G04312 Aquilegia oxysepala HOM05D000535 ORTHO05D000427 9.9e-07 57.0 80 36.2
Peaxi162Scf00643g00055 Petunia axillaris HOM05D000535 ORTHO05D000427 9.9e-07 57.0 71 39.4
Solyc06g072220.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 9.9e-07 57.0 71 40.8
Sopen06g028540 Solanum pennellii HOM05D000535 ORTHO05D000427 9.9e-07 57.0 71 40.8
Sopen06g028550 Solanum pennellii HOM05D000535 ORTHO05D000427 9.9e-07 57.0 85 36.5
Glyma.09G163600 Glycine max HOM05D000535 ORTHO05D000427 1.3e-06 56.6 64 42.2
Lju170C19T1 Lonicera japonica HOM05D000535 ORTHO05D000427 1.3e-06 56.6 71 40.8
HanXRQChr08g0211651 Helianthus annuus HOM05D000535 ORTHO05D000427 1.7e-06 56.2 82 35.4
HanXRQChr08g0211901 Helianthus annuus HOM05D000535 ORTHO05D000427 1.7e-06 56.2 82 35.4
Ah.03g135110 Amaranthus hybridus HOM05D000535 ORTHO05D000427 2.2e-06 55.8 73 42.5
CARHR018480 Cardamine hirsuta HOM05D000535 ORTHO05D000427 2.2e-06 55.8 93 36.6
Lsat_1_v5_gn_2_111441 Lactuca sativa HOM05D000535 ORTHO05D000427 2.2e-06 55.8 82 40.2
Lju170C17T0 Lonicera japonica HOM05D000535 ORTHO05D000427 2.2e-06 55.8 71 42.3
Nitab4.5_0002771g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 2.2e-06 55.8 71 40.8
Peaxi162Scf00643g00538 Petunia axillaris HOM05D000535 ORTHO05D000427 2.2e-06 55.8 71 38.0
CSS0016167 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 2.9e-06 55.5 72 40.3
CSS0021540 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 2.9e-06 55.5 62 43.5
CSS0030185 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 2.9e-06 55.5 62 43.5
Ciclev10023257m.g Citrus clementina HOM05D000535 ORTHO05D000427 2.9e-06 55.5 71 39.4
Lju170C20T6 Lonicera japonica HOM05D000535 ORTHO05D000427 2.9e-06 55.5 71 39.4
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 3.8e-06 55.1 64 39.1
CAN.G74.22 Capsicum annuum HOM05D000535 ORTHO05D000427 3.8e-06 55.1 74 37.8
VMungo0464G1832 Vigna mungo HOM05D000535 ORTHO05D000427 3.8e-06 55.1 63 39.7
Ciclev10022211m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 73 39.7
Ciclev10022276m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
Ciclev10022282m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
Ciclev10022911m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 94 35.1
Ciclev10023320m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
Ciclev10024528m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
Ciclev10024584m.g Citrus clementina HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
HanXRQChr06g0165061 Helianthus annuus HOM05D000535 ORTHO05D000427 4.9e-06 54.7 73 41.1
HanXRQChr17g0550511 Helianthus annuus HOM05D000535 ORTHO05D000427 4.9e-06 54.7 81 37.0
Lj2g0027096 Lotus japonicus HOM05D000535 ORTHO05D000427 4.9e-06 54.7 61 45.9
PGSC0003DMG400027052 Solanum tuberosum HOM05D000535 ORTHO05D000427 4.9e-06 54.7 64 42.2
PGSC0003DMG400027053 Solanum tuberosum HOM05D000535 ORTHO05D000427 4.9e-06 54.7 71 39.4
VMungo0464G1866 Vigna mungo HOM05D000535 ORTHO05D000427 4.9e-06 54.7 64 42.2
Ciclev10021858m.g Citrus clementina HOM05D000535 ORTHO05D000427 6.4e-06 54.3 71 39.4
Ciclev10023371m.g Citrus clementina HOM05D000535 ORTHO05D000427 6.4e-06 54.3 71 39.4
Ciclev10023581m.g Citrus clementina HOM05D000535 ORTHO05D000427 6.4e-06 54.3 71 39.4
Lju170C19T0 Lonicera japonica HOM05D000535 ORTHO05D000427 6.4e-06 54.3 71 39.4
Ah.04g155680 Amaranthus hybridus HOM05D000535 ORTHO05D000427 8.4e-06 53.9 70 38.6
CAN.G65.70 Capsicum annuum HOM05D000535 ORTHO05D000427 8.4e-06 53.9 69 42.0
Hma1.2p1_0989F.1_g244860 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 8.4e-06 53.9 60 43.3
Oeu043974.1 Olea europaea HOM05D000535 ORTHO05D000427 8.4e-06 53.9 69 42.0
Psat1g122400 Pisum sativum HOM05D000535 ORTHO05D000427 8.4e-06 53.9 64 42.2
Psat1g122440 Pisum sativum HOM05D000535 ORTHO05D000427 8.4e-06 53.9 64 40.6


User provided reference genes

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