Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 5.2e-136 487.6 233 100.0
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.0e-83 313.9 195 75.9
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 3.3e-82 308.9 193 74.6
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 1.2e-81 307.0 187 74.9
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 4.7e-81 305.1 201 70.6
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 1.1e-80 303.9 182 78.6
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.4e-80 303.5 172 80.2
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 3.1e-80 302.4 214 67.8
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 4.0e-80 302.0 166 82.5
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 1.2e-79 300.4 180 76.1
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 1.5e-79 300.1 169 81.7
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.5e-79 300.1 233 63.5
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 2.0e-79 299.7 169 81.1
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 3.4e-79 298.9 166 81.9
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 3.4e-79 298.9 166 81.3
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 2.9e-78 295.8 170 77.6
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 2.9e-78 295.8 177 78.5
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 2.9e-78 295.8 203 70.4
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 6.4e-78 294.7 217 65.0
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 6.4e-78 294.7 195 71.3
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 6.4e-78 294.7 217 65.0
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 6.4e-78 294.7 166 80.1
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 6.4e-78 294.7 169 75.7
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 6.4e-78 294.7 181 75.7
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 1.4e-77 293.5 169 78.7
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 1.4e-77 293.5 165 81.2
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 3.2e-77 292.4 168 78.0
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 4.1e-77 292.0 165 78.8
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 4.1e-77 292.0 168 78.6
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 9.2e-77 290.8 183 72.7
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 9.2e-77 290.8 165 78.2
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 1.2e-76 290.4 168 81.0
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.2e-76 290.4 188 71.3
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 1.6e-76 290.0 181 74.0
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 2.1e-76 289.7 181 72.9
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.1e-76 289.7 185 72.4
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 2.1e-76 289.7 183 72.7
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 2.7e-76 289.3 197 70.6
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 2.7e-76 289.3 164 80.5
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 3.5e-76 288.9 191 73.8
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 4.6e-76 288.5 165 80.0
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 6.0e-76 288.1 165 78.8
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 6.0e-76 288.1 165 80.0
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 7.8e-76 287.7 173 79.2
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 7.8e-76 287.7 176 75.6
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 1.0e-75 287.3 166 78.3
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 1.0e-75 287.3 176 75.0
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 1.0e-75 287.3 176 75.6
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.3e-75 287.0 167 78.4
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 1.7e-75 286.6 203 66.5
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 1.7e-75 286.6 165 79.4
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.7e-75 286.6 190 71.1
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 2.3e-75 286.2 171 76.6
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 2.3e-75 286.2 196 68.9
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 3.9e-75 285.4 217 65.0
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 3.9e-75 285.4 168 79.8
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 5.1e-75 285.0 209 67.0
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 5.1e-75 285.0 201 69.2
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 5.1e-75 285.0 166 76.5
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 8.6e-75 284.3 164 77.4
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 8.6e-75 284.3 166 78.3
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 1.1e-74 283.9 183 74.3
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 1.5e-74 283.5 201 67.2
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 2.5e-74 282.7 176 73.3
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.3e-74 282.3 209 64.6
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 4.3e-74 282.0 176 73.9
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.2e-73 280.4 172 75.0
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 2.8e-73 279.3 167 78.4
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.6e-73 278.9 173 74.6
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 8.1e-73 277.7 212 63.2
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 1.4e-72 276.9 157 79.0
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 1.4e-72 276.9 158 79.1
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.4e-72 276.9 171 74.9
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 3.1e-72 275.8 166 77.7
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 8.9e-72 274.2 278 52.9
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.5e-71 273.5 166 77.7
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 2.0e-71 273.1 178 71.9
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 1.4e-69 266.9 166 75.3
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 1.9e-69 266.5 193 68.9
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 9.3e-69 264.2 198 65.2
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 9.3e-69 264.2 157 77.7
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 9.3e-69 264.2 207 64.7
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.7e-67 260.0 192 66.7
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 3.0e-67 259.2 167 73.1
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 4.5e-63 245.4 173 69.9
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 5.8e-63 245.0 163 69.3
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 9.3e-61 237.7 181 61.9
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 2.5e-58 229.6 186 56.5
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 1.3e-57 227.3 171 60.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 1.1e-56 224.2 167 60.5
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.9e-54 215.3 119 83.2
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 6.4e-54 214.9 149 65.8
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 5.1e-51 205.3 157 64.3
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 8.7e-51 204.5 130 73.8
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.6e-49 200.3 111 82.0
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 6.2e-49 198.4 211 51.2
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 6.9e-40 168.3 166 47.0
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 9.0e-40 167.9 186 43.5
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 2.9e-38 162.9 195 45.1
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 8.7e-35 151.4 106 69.8
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 2.8e-25 119.8 63 81.0
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 2.6e-23 113.2 163 42.3
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 2.9e-22 109.8 63 74.6
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 1.1e-21 107.8 210 32.4
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 7.0e-16 88.6 222 27.5
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 3.5e-15 86.3 57 75.4
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 1.0e-11 74.7 43 72.1
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 1.8e-11 73.9 167 33.5


User provided reference genes

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