Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 1.2e-49 199.5 103 100.0
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 5.6e-18 94.4 60 88.3
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 1.1e-10 70.1 61 65.6
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.9e-10 69.3 60 65.0
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.5e-10 68.9 60 63.3
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 3.3e-10 68.6 58 63.8
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 3.3e-10 68.6 58 63.8
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 4.3e-10 68.2 60 61.7
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 5.6e-10 67.8 57 66.7
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 7.3e-10 67.4 60 61.7
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.3e-09 66.6 81 53.1
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 1.3e-09 66.6 60 63.3
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 1.3e-09 66.6 60 61.7
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.6e-09 66.2 59 62.7
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 1.6e-09 66.2 60 61.7
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 1.6e-09 66.2 86 47.7
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 1.6e-09 66.2 58 62.1
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 2.1e-09 65.9 60 61.7
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 2.1e-09 65.9 58 63.8
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 60.0
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 63.3
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 60.0
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 2.8e-09 65.5 84 48.8
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 56.7
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 56.7
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 61.7
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 2.8e-09 65.5 60 61.7
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 3.6e-09 65.1 62 62.9
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 3.6e-09 65.1 60 56.7
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 3.6e-09 65.1 60 56.7
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 3.6e-09 65.1 64 56.2
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 3.6e-09 65.1 60 58.3
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 3.6e-09 65.1 58 63.8
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 3.6e-09 65.1 60 58.3
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 3.6e-09 65.1 60 60.0
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 6.2e-09 64.3 60 61.7
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 6.2e-09 64.3 59 61.0
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 6.2e-09 64.3 60 56.7
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 6.2e-09 64.3 60 58.3
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 6.2e-09 64.3 62 56.5
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 6.2e-09 64.3 77 50.6
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 6.2e-09 64.3 60 56.7
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 6.2e-09 64.3 58 62.1
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 6.2e-09 64.3 58 62.1
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 8.1e-09 63.9 60 58.3
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 8.1e-09 63.9 60 58.3
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 1.1e-08 63.5 60 60.0
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 1.1e-08 63.5 60 58.3
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 1.1e-08 63.5 60 56.7
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 1.1e-08 63.5 59 61.0
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 1.1e-08 63.5 60 56.7
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 1.4e-08 63.2 60 60.0
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 1.4e-08 63.2 60 56.7
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 1.4e-08 63.2 60 56.7
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 1.4e-08 63.2 57 61.4
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 1.8e-08 62.8 57 63.2
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 1.8e-08 62.8 57 63.2
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-08 62.8 59 57.6
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-08 62.8 59 57.6
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-08 62.8 59 57.6
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 2.4e-08 62.4 60 58.3
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 2.4e-08 62.4 60 56.7
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 2.4e-08 62.4 60 55.0
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 2.4e-08 62.4 60 56.7
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 56.7
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 3.1e-08 62.0 60 53.3
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 4.0e-08 61.6 60 55.0
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 5.3e-08 61.2 60 61.7
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 5.3e-08 61.2 60 56.7
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 5.3e-08 61.2 60 53.3
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 5.3e-08 61.2 60 53.3
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 6.9e-08 60.8 60 55.0
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 9.0e-08 60.5 60 55.0
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 1.2e-07 60.1 72 48.6
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 1.2e-07 60.1 57 63.2
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.2e-07 60.1 60 55.0
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 1.2e-07 60.1 57 59.6
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.5e-07 59.7 60 53.3
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 1.5e-07 59.7 67 50.7
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 1.5e-07 59.7 85 45.9
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 2.0e-07 59.3 60 55.0
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 2.0e-07 59.3 60 56.7
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 2.0e-07 59.3 60 51.7
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 2.6e-07 58.9 61 55.7
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 3.4e-07 58.5 60 53.3
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 3.4e-07 58.5 60 53.3
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 3.4e-07 58.5 62 53.2
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 3.4e-07 58.5 60 53.3
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 4.5e-07 58.2 60 56.7
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 4.5e-07 58.2 60 56.7
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 4.5e-07 58.2 66 48.5
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 4.5e-07 58.2 60 48.3
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 5.8e-07 57.8 61 49.2
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 51.7
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 51.7
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 56.7
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.6e-07 57.4 60 50.0
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 9.9e-07 57.0 60 51.7
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 9.9e-07 57.0 60 51.7
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 1.3e-06 56.6 60 51.7
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 1.7e-06 56.2 58 51.7
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 2.2e-06 55.8 60 55.0
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 2.9e-06 55.5 60 51.7
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 2.9e-06 55.5 60 53.3
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 3.8e-06 55.1 73 49.3
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.9e-06 54.7 60 48.3
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 6.4e-06 54.3 65 46.2
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 6.4e-06 54.3 64 45.3
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 6.4e-06 54.3 62 46.8
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 6.4e-06 54.3 57 57.9


User provided reference genes

Program Settings