Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09254 Nelumbo nucifera HOM05D000554 ORTHO05D272786 2.5e-31 137.9 59 100.0
Nn7g37647 Nelumbo nucifera HOM05D000554 ORTHO05D000860 2.8e-14 81.3 42 81.0
Glyma.12G053500 Glycine max HOM05D000554 ORTHO05D000860 9.4e-10 66.2 43 65.1
Glyma.11G129000 Glycine max HOM05D000554 ORTHO05D000860 1.2e-09 65.9 43 65.1
Glyma.13G343300 Glycine max HOM05D000554 ORTHO05D000860 1.0e-08 62.8 42 59.5
Glyma.15G031100 Glycine max HOM05D000554 ORTHO05D000860 1.0e-08 62.8 42 59.5
Eucgr.A00057 Eucalyptus grandis HOM05D000554 ORTHO05D000860 3.0e-08 61.2 41 65.9
Eucgr.A00261 Eucalyptus grandis HOM05D000554 ORTHO05D000860 3.0e-08 61.2 41 65.9
Lalb_Chr03g0026161 Lupinus albus HOM05D000554 ORTHO05D000860 6.7e-08 60.1 43 58.1
VMungo1127G1545 Vigna mungo HOM05D000554 ORTHO05D000860 1.1e-07 59.3 43 60.5
Ah.06g195280 Amaranthus hybridus HOM05D000554 ORTHO05D000860 4.4e-07 57.4 45 55.6
Eucgr.H02146 Eucalyptus grandis HOM05D000554 ORTHO05D000860 5.7e-07 57.0 41 61.0
RcHm_v2.0_Chr3g0447471 Rosa chinensis HOM05D000554 ORTHO05D000860 5.7e-07 57.0 45 53.3
Lj3g0001003 Lotus japonicus HOM05D000554 ORTHO05D000860 7.4e-07 56.6 43 55.8
Prupe.6G364600 Prunus persica HOM05D000554 ORTHO05D000860 7.4e-07 56.6 45 53.3
Phvul.005G152000 Phaseolus vulgaris HOM05D000554 ORTHO05D000860 9.7e-07 56.2 43 55.8
AUR62006624 Chenopodium quinoa HOM05D000554 ORTHO05D000860 1.3e-06 55.8 45 48.9
Dinv29079 Davidia involucrata HOM05D000554 ORTHO05D000860 1.3e-06 55.8 45 53.3
FAN02G2231 Fragaria x ananassa HOM05D000554 ORTHO05D000860 1.7e-06 55.5 45 51.1
Actinidia03246 Actinidia chinensis HOM05D000554 ORTHO05D000860 2.8e-06 54.7 45 55.6
Phvul.011G055500 Phaseolus vulgaris HOM05D000554 ORTHO05D000860 2.8e-06 54.7 44 54.5
Nn1g09599 Nelumbo nucifera HOM05D000554 ORTHO05D000860 3.7e-06 54.3 30 63.3
Lalb_Chr14g0372421 Lupinus albus HOM05D000554 ORTHO05D000860 4.8e-06 53.9 41 56.1
ATR0743G035 Amborella trichopoda HOM05D000554 ORTHO05D000860 6.3e-06 53.5 46 54.3
arahy.Tifrunner.gnm1.ann1.LX8RGZ Arachis hypogaea HOM05D000554 ORTHO05D000860 6.3e-06 53.5 44 52.3
MD04G1248300 Malus domestica HOM05D000554 ORTHO05D000860 8.2e-06 53.1 45 48.9
Peaxi162Scf00296g00116 Petunia axillaris HOM05D000554 ORTHO05D000860 8.2e-06 53.1 44 52.3


User provided reference genes

Program Settings