Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09175 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.3e-72 276.2 129 100.0
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.5e-68 262.7 128 96.1
Nn8g40395 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.2e-62 243.0 119 95.0
Nn5g27508 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.7e-43 179.5 125 73.6
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 2.2e-35 152.5 138 58.0
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 7.2e-31 137.5 138 49.3
TAR371G0889 Trochodendron aralioides HOM05D001536 ORTHO05D001442 3.1e-26 122.1 132 47.7
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 9.2e-26 120.6 137 46.0
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.5e-23 113.2 127 46.5
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 4.0e-21 105.1 136 42.6
Dinv16702 Davidia involucrata HOM05D001536 ORTHO05D001442 1.8e-18 96.3 137 38.7
Dinv33801 Davidia involucrata HOM05D001536 ORTHO05D001442 1.2e-17 93.6 133 36.8
CiPaw.05G128200 Carya illinoinensis HOM05D001536 ORTHO05D001442 1.7e-16 89.7 136 38.2
RcHm_v2.0_Chr4g0438891 Rosa chinensis HOM05D001536 ORTHO05D001442 3.9e-16 88.6 138 36.2
Lalb_Chr09g0329111 Lupinus albus HOM05D001536 ORTHO05D001442 1.5e-15 86.7 139 41.0
Thecc.02G336800 Theobroma cacao HOM05D001536 ORTHO05D001442 1.5e-15 86.7 133 37.6
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 1.9e-15 86.3 136 35.3
Phvul.002G069600 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 2.5e-15 85.9 135 39.3
Dinv11493 Davidia involucrata HOM05D001536 ORTHO05D001442 7.3e-15 84.3 131 35.9
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 9.5e-15 84.0 129 36.4
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 2.1e-14 82.8 137 33.6
Glyma.07G227100 Glycine max HOM05D001536 ORTHO05D001442 2.8e-14 82.4 132 38.6
Glyma.20G027500 Glycine max HOM05D001536 ORTHO05D001442 2.8e-14 82.4 138 37.0
Lalb_Chr05g0220121 Lupinus albus HOM05D001536 ORTHO05D001442 2.8e-14 82.4 142 38.0
FAN07G0538 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.7e-14 81.6 136 33.1
Medtr4g082510 Medicago truncatula HOM05D001536 ORTHO05D001442 4.7e-14 81.6 133 37.6
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 6.2e-14 81.3 138 32.6
VMungo1215G2164 Vigna mungo HOM05D001536 ORTHO05D001442 8.0e-14 80.9 133 38.3
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.4e-13 80.1 136 33.8
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.4e-13 80.1 136 33.8
CiPaw.06G089900 Carya illinoinensis HOM05D001536 ORTHO05D001442 1.8e-13 79.7 137 36.5
Glyma.02G113300 Glycine max HOM05D001536 ORTHO05D001442 1.8e-13 79.7 121 36.4
Manes.01G030700 Manihot esculenta HOM05D001536 ORTHO05D001442 2.3e-13 79.3 138 36.2
COL.COLO4_27938 Corchorus olitorius HOM05D001536 ORTHO05D001442 3.1e-13 79.0 133 37.6
Gohir.D13G079500 Gossypium hirsutum HOM05D001536 ORTHO05D001442 4.0e-13 78.6 135 37.8
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 6.8e-13 77.8 133 37.6
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 6.8e-13 77.8 137 32.1
Psat7g134840 Pisum sativum HOM05D001536 ORTHO05D001442 1.2e-12 77.0 141 36.2
Actinidia12316 Actinidia chinensis HOM05D001536 ORTHO05D001442 1.5e-12 76.6 136 35.3
Haze_11937 Corylus avellana HOM05D001536 ORTHO05D001442 1.5e-12 76.6 137 35.0
Gohir.D05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.5e-12 76.6 112 41.1
Lj2g0017216 Lotus japonicus HOM05D001536 ORTHO05D001442 1.5e-12 76.6 137 33.6
Gohir.A05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.0e-12 76.3 112 41.1
Gorai.009G325900 Gossypium raimondii HOM05D001536 ORTHO05D001442 2.6e-12 75.9 112 41.1
Lj4g0002221 Lotus japonicus HOM05D001536 ORTHO05D001442 2.6e-12 75.9 114 37.7
VMungo0251G0497 Vigna mungo HOM05D001536 ORTHO05D001442 2.6e-12 75.9 139 34.5
Atru.chr11.1694 Acer truncatum HOM05D001536 ORTHO05D001442 3.4e-12 75.5 139 38.1
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 3.4e-12 75.5 141 35.5
Gohir.A13G079800 Gossypium hirsutum HOM05D001536 ORTHO05D001442 3.4e-12 75.5 135 37.0
Gorai.013G090900 Gossypium raimondii HOM05D001536 ORTHO05D001442 3.4e-12 75.5 135 37.0
TPR.G34059 Trifolium pratense HOM05D001536 ORTHO05D001442 3.4e-12 75.5 132 36.4
FAN22G0581 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.4e-12 75.1 139 31.7
Glyma.01G054800 Glycine max HOM05D001536 ORTHO05D001442 5.8e-12 74.7 122 33.6
Manes.05G107500 Manihot esculenta HOM05D001536 ORTHO05D001442 1.3e-11 73.6 138 34.8
Duzib248G0148 Durio zibethinus HOM05D001536 ORTHO05D001442 1.7e-11 73.2 134 38.1
Duzib251G0780 Durio zibethinus HOM05D001536 ORTHO05D001442 1.7e-11 73.2 133 34.6
PSO017G1876 Papaver somniferum HOM05D001536 ORTHO05D001442 1.7e-11 73.2 140 35.0
EL10Ac6g14955 Beta vulgaris HOM05D001536 ORTHO05D001442 2.9e-11 72.4 115 40.0
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.7e-11 72.0 126 34.1
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.7e-11 72.0 126 34.1
Lalb_Chr17g0340961 Lupinus albus HOM05D001536 ORTHO05D001442 3.7e-11 72.0 142 34.5
Cfa008911 Carpinus fangiana HOM05D001536 ORTHO05D001442 4.9e-11 71.6 137 33.6
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 1.1e-10 70.5 138 32.6
Ca_25949_v3 Cicer arietinum L. HOM05D001536 ORTHO05D001442 1.4e-10 70.1 138 32.6
Phvul.002G167700 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 1.9e-10 69.7 133 35.3
MD16G1065200 Malus domestica HOM05D001536 ORTHO05D001442 2.4e-10 69.3 129 32.6
Gohir.A12G162600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 7.0e-10 67.8 132 32.6
PSO478G3214 Papaver somniferum HOM05D001536 ORTHO05D001442 7.0e-10 67.8 140 33.6
arahy.Tifrunner.gnm1.ann1.BZ8U3A Arachis hypogaea HOM05D001536 ORTHO05D001442 9.2e-10 67.4 138 31.9
QL03p070806 Quercus lobata HOM05D001536 ORTHO05D001442 1.2e-09 67.0 135 33.3
vmacro16367 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 1.2e-09 67.0 130 33.1
Lalb_Chr10g0098571 Lupinus albus HOM05D001536 ORTHO05D001442 2.0e-09 66.2 124 32.3
Sabra10G0123100 Salix brachista HOM05D001536 ORTHO05D001442 2.0e-09 66.2 130 33.1
Potri.008G092800 Populus trichocarpa HOM05D001536 ORTHO05D001442 3.5e-09 65.5 131 35.9
arahy.Tifrunner.gnm1.ann1.ULDL2L Arachis hypogaea HOM05D001536 ORTHO05D001442 4.6e-09 65.1 137 30.7
Lj3C1032T12 Lonicera japonica HOM05D001536 ORTHO05D001442 4.6e-09 65.1 131 32.1
Gorai.008G178300 Gossypium raimondii HOM05D001536 ORTHO05D001442 7.8e-09 64.3 132 31.8
Gohir.D12G165600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.3e-08 62.8 136 32.4
AUR62003138 Chenopodium quinoa HOM05D001536 ORTHO05D001442 3.0e-08 62.4 115 37.4
AUR62007958 Chenopodium quinoa HOM05D001536 ORTHO05D001442 3.0e-08 62.4 114 36.0
ClCG05G023880 Citrullus lanatus HOM05D001536 ORTHO05D001442 3.0e-08 62.4 138 29.7
DCAR_030980 Daucus carota HOM05D001536 ORTHO05D001442 1.1e-07 60.5 128 31.2
Nitab4.5_0000014g0250 Nicotiana tabacum HOM05D001536 ORTHO05D001442 1.1e-07 60.5 135 28.9
TWI31G0752 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 1.5e-07 60.1 137 32.1
Potri.017G088900 Populus trichocarpa HOM05D001536 ORTHO05D001442 1.9e-07 59.7 127 30.7
Potri.010G162000 Populus trichocarpa HOM05D001536 ORTHO05D001442 3.3e-07 58.9 132 34.8
CsaV3_5G033140 Cucumis sativus L. HOM05D001536 ORTHO05D001442 4.3e-07 58.5 139 29.5
Ah.03g139200 Amaranthus hybridus HOM05D000001 ORTHO05D000003 7.3e-07 57.8 117 30.8
Nitab4.5_0000520g0040 Nicotiana tabacum HOM05D001536 ORTHO05D001442 7.3e-07 57.8 131 28.2
CANSAT64G3017 Cannabis sativa HOM05D001536 ORTHO05D001442 9.5e-07 57.4 107 34.6
THA.LOC104822901 Tarenaya hassleriana HOM05D001536 ORTHO05D001442 1.2e-06 57.0 103 37.9
Cc11_g12410 Coffea canephora HOM05D001536 ORTHO05D001442 1.6e-06 56.6 121 33.9
MELO3C012134.2 Cucumis melo HOM05D001536 ORTHO05D001442 1.6e-06 56.6 139 29.5
PSO017G3159 Papaver somniferum HOM05D001536 ORTHO05D001442 1.6e-06 56.6 48 47.9
PSO478G3501 Papaver somniferum HOM05D001536 ORTHO05D001442 1.6e-06 56.6 48 47.9
PGSC0003DMG400002849 Solanum tuberosum HOM05D001536 ORTHO05D001442 3.6e-06 55.5 140 34.3
Solyc05g012640.3 Solanum lycopersicum HOM05D001536 ORTHO05D001442 4.7e-06 55.1 131 31.3
THA.LOC104822024 Tarenaya hassleriana HOM05D001536 ORTHO05D001442 8.1e-06 54.3 133 27.8


User provided reference genes

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