Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09158 Nelumbo nucifera HOM05D000828 ORTHO05D000623 1.5e-33 145.6 74 100.0
Nn1g04457 Nelumbo nucifera HOM05D000828 ORTHO05D000623 5.1e-21 104.0 71 77.5
TAR624G0843 Trochodendron aralioides HOM05D000828 ORTHO05D000623 2.5e-12 75.1 71 60.6
Actinidia18801 Actinidia chinensis HOM05D000828 ORTHO05D000623 2.4e-10 68.6 71 49.3
Sopen02g021540 Solanum pennellii HOM05D000828 ORTHO05D000623 3.1e-10 68.2 68 50.0
Gohir.D02G192300 Gossypium hirsutum HOM05D000828 ORTHO05D000623 4.0e-10 67.8 71 46.5
PSO135G0104 Papaver somniferum HOM05D000828 ORTHO05D000623 6.9e-10 67.0 72 52.8
Gohir.A03G169100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 9.0e-10 66.6 71 45.1
Gorai.005G215100 Gossypium raimondii HOM05D000828 ORTHO05D000623 9.0e-10 66.6 71 45.1
Solyc02g072570.2 Solanum lycopersicum HOM05D000828 ORTHO05D000623 9.0e-10 66.6 68 50.0
Migut.H01438 Erythranthe guttata HOM05D000828 ORTHO05D000623 1.2e-09 66.2 68 52.9
PGSC0003DMG400028480 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.5e-09 65.9 68 48.5
Aqoxy1G02029 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 2.0e-09 65.5 72 52.8
Actinidia16788 Actinidia chinensis HOM05D000828 ORTHO05D000623 2.6e-09 65.1 70 52.9
COL.COLO4_31273 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.6e-09 65.1 70 45.7
Prupe.4G062800 Prunus persica HOM05D000828 ORTHO05D000623 2.6e-09 65.1 71 47.9
PSO724G0291 Papaver somniferum HOM05D000828 ORTHO05D000623 3.4e-09 64.7 72 50.0
PGR031G0760 Punica granatum HOM05D000828 ORTHO05D000623 3.4e-09 64.7 70 48.6
CiPaw.09G070800 Carya illinoinensis HOM05D000828 ORTHO05D000623 4.5e-09 64.3 71 46.5
Migut.M00720 Erythranthe guttata HOM05D000828 ORTHO05D000623 4.5e-09 64.3 71 45.1
FvH4_3g07640 Fragaria vesca HOM05D000828 ORTHO05D000623 5.8e-09 63.9 71 46.5
FAN25G3729 Fragaria x ananassa HOM05D000828 ORTHO05D000623 5.8e-09 63.9 71 46.5
Gohir.D05G157250 Gossypium hirsutum HOM05D000828 ORTHO05D000623 5.8e-09 63.9 71 45.1
Gorai.009G161700 Gossypium raimondii HOM05D000828 ORTHO05D000623 5.8e-09 63.9 71 45.1
CDE04G2092 Ceratophyllum demersum HOM05D000828 ORTHO05D000623 7.6e-09 63.5 67 44.8
Cc02_g15150 Coffea canephora HOM05D000828 ORTHO05D000623 7.6e-09 63.5 71 45.1
PSO675G4187 Papaver somniferum HOM05D000828 ORTHO05D000623 7.6e-09 63.5 74 48.6
Hma1.2p1_0215F.1_g090900 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 1.0e-08 63.2 71 49.3
Sopen02g021520 Solanum pennellii HOM05D000828 ORTHO05D000623 1.0e-08 63.2 68 45.6
Sopen02g021530 Solanum pennellii HOM05D000828 ORTHO05D000623 1.0e-08 63.2 68 47.1
Thecc.06G168700 Theobroma cacao HOM05D000828 ORTHO05D000623 1.0e-08 63.2 70 44.3
Dinv18367 Davidia involucrata HOM05D000828 ORTHO05D000623 1.3e-08 62.8 71 50.7
Dinv40694 Davidia involucrata HOM05D000828 ORTHO05D000623 1.3e-08 62.8 71 46.5
FAN11G2205 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.3e-08 62.8 71 46.5
CiPaw.10G060200 Carya illinoinensis HOM05D000828 ORTHO05D000623 2.2e-08 62.0 71 47.9
SalBow7G4758 Salvia bowleyana HOM05D000828 ORTHO05D000623 2.2e-08 62.0 67 47.8
RcHm_v2.0_Chr5g0011041 Rosa chinensis HOM05D000828 ORTHO05D000623 4.9e-08 60.8 71 43.7
Migut.M00704 Erythranthe guttata HOM05D000828 ORTHO05D000623 6.5e-08 60.5 71 42.3
MBI07_g09557_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 8.4e-08 60.1 69 46.4
CDE03G0485 Ceratophyllum demersum HOM05D000044 ORTHO05D000623 1.1e-07 59.7 68 39.7
CAN.G370.97 Capsicum annuum HOM05D000828 ORTHO05D000623 1.4e-07 59.3 72 43.1
Nitab4.5_0013297g0020 Nicotiana tabacum HOM05D000828 ORTHO05D000623 1.4e-07 59.3 68 44.1
Solyc02g073570.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 1.9e-07 58.9 72 45.8
Sopen02g021560 Solanum pennellii HOM05D000828 ORTHO05D000623 1.9e-07 58.9 72 45.8
PGSC0003DMG400028441 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.9e-07 58.9 70 45.7
ATR0012G056 Amborella trichopoda HOM05D000828 ORTHO05D000623 2.5e-07 58.5 67 43.3
Aa31LG9G7230 Aethionema arabicum HOM05D000828 ORTHO05D000623 3.2e-07 58.2 70 44.3
Eucgr.F03275 Eucalyptus grandis HOM05D000828 ORTHO05D000623 3.2e-07 58.2 70 44.3
Nitab4.5_0011383g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 3.2e-07 58.2 68 42.6
Nitab4.5_0014144g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 3.2e-07 58.2 75 46.7
PSO541G1490 Papaver somniferum HOM05D000828 ORTHO05D000623 3.2e-07 58.2 73 45.2
Carub.0008s0213 Capsella rubella HOM05D000828 ORTHO05D000623 4.2e-07 57.8 70 44.3
Cpa.g.c34917 Carica papaya HOM05D000828 ORTHO05D000623 7.1e-07 57.0 71 42.3
PGSC0003DMG400028482 Solanum tuberosum HOM05D000828 ORTHO05D000623 7.1e-07 57.0 68 44.1
PSO170G2137 Papaver somniferum HOM05D000828 ORTHO05D000623 1.2e-06 56.2 71 42.3
CAN.G370.100 Capsicum annuum HOM05D000828 ORTHO05D000623 1.6e-06 55.8 70 44.3
Manes.17G057000 Manihot esculenta HOM05D000828 ORTHO05D000623 1.6e-06 55.8 73 37.0
Peaxi162Scf01009g00022 Petunia axillaris HOM05D000828 ORTHO05D000623 1.6e-06 55.8 77 41.6
Sopen02g021580 Solanum pennellii HOM05D000828 ORTHO05D000623 1.6e-06 55.8 68 41.2
COL.COLO4_31275 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.1e-06 55.5 70 38.6
FAN16G2164 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.1e-06 55.5 63 44.4
MBI06_g08610_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 2.1e-06 55.5 71 40.8
MBI06_g45399_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 2.1e-06 55.5 71 40.8
Nitab4.5_0003997g0020 Nicotiana tabacum HOM05D000828 ORTHO05D000623 2.7e-06 55.1 76 46.1
Migut.M01026 Erythranthe guttata HOM05D000828 ORTHO05D000623 3.5e-06 54.7 73 45.2
Thhalv10001138m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 4.6e-06 54.3 70 41.4
PSO170G2808 Papaver somniferum HOM05D000828 ORTHO05D000623 4.6e-06 54.3 77 45.5
Peaxi162Scf00854g00031 Petunia axillaris HOM05D000828 ORTHO05D000623 4.6e-06 54.3 71 42.3
Sp2g10750 Schrenkiella parvula HOM05D000828 ORTHO05D000623 4.6e-06 54.3 70 41.4
AT5G45830 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 6.0e-06 53.9 70 42.9
Thhalv10025925m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 6.0e-06 53.9 70 42.9
Nitab4.5_0000605g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.0e-06 53.9 70 41.4
PSO724G0379 Papaver somniferum HOM05D000828 ORTHO05D000623 6.0e-06 53.9 76 44.7


User provided reference genes

Program Settings