Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 0.0e+00 1142.5 569 100.0
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.2e-287 992.6 568 85.6
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.4e-283 979.2 569 83.7
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.4e-274 947.6 569 80.0
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.4e-272 942.6 571 80.4
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 2.4e-272 941.8 571 80.2
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 1.2e-271 939.5 574 80.5
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 3.5e-271 937.9 575 79.3
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 4.6e-271 937.6 568 80.5
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 4.6e-271 937.6 568 79.8
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 7.8e-271 936.8 575 79.1
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 3.0e-270 934.9 570 79.5
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 1.5e-269 932.6 571 79.7
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 7.3e-269 930.2 570 79.5
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 9.6e-269 929.9 571 79.3
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.3e-268 929.5 577 78.5
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.3e-268 929.5 565 80.0
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 2.1e-268 928.7 575 79.3
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 4.8e-268 927.5 577 78.2
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 4.8e-268 927.5 570 78.9
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 6.2e-268 927.2 571 79.3
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 8.1e-268 926.8 577 79.0
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.8e-267 925.6 571 79.3
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 5.3e-267 924.1 571 78.8
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 5.3e-267 924.1 573 79.1
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 2.0e-266 922.2 580 77.4
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 3.4e-266 921.4 571 78.6
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 7.6e-266 920.2 568 77.8
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 7.6e-266 920.2 572 78.0
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 9.9e-266 919.8 569 78.2
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 1.1e-264 916.4 561 81.1
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 1.4e-264 916.0 578 77.3
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 1.9e-264 915.6 571 77.6
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 2.1e-263 912.1 568 77.8
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.5e-263 911.4 579 77.4
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 4.6e-263 911.0 565 78.1
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 6.0e-263 910.6 574 78.2
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 7.9e-263 910.2 572 77.4
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 2.3e-262 908.7 579 76.7
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 1.9e-261 905.6 577 78.2
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 1.6e-260 902.5 566 78.6
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.6e-260 902.5 603 73.8
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.6e-260 902.5 573 76.4
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 3.6e-260 901.4 570 76.7
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 1.1e-259 899.8 528 81.4
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 1.4e-259 899.4 568 77.1
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 9.0e-259 896.7 570 76.0
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 1.5e-258 896.0 572 77.6
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 2.6e-258 895.2 571 76.5
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 7.6e-258 893.6 570 75.8
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 9.9e-258 893.3 573 76.1
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 3.2e-256 888.3 573 76.4
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 3.2e-256 888.3 573 76.4
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 5.5e-256 887.5 576 75.9
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 1.2e-255 886.3 514 83.3
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 7.9e-255 883.6 567 76.5
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 7.9e-255 883.6 623 71.4
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 1.3e-254 882.9 531 79.3
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 2.3e-254 882.1 572 75.7
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 3.9e-254 881.3 572 74.8
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 8.7e-254 880.2 570 75.3
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.1e-253 879.8 573 74.9
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 4.8e-252 874.4 567 76.0
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 8.1e-252 873.6 531 78.9
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 8.1e-252 873.6 557 75.9
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 1.1e-251 873.2 572 76.2
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 1.4e-251 872.8 593 71.5
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 1.8e-251 872.5 570 73.0
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 3.1e-251 871.7 568 73.9
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 2.0e-250 869.0 567 73.0
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 2.0e-250 869.0 567 73.0
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.0e-249 866.7 577 74.9
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 1.7e-249 865.9 566 73.0
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 2.2e-249 865.5 568 72.7
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 2.2e-249 865.5 514 80.4
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 3.8e-249 864.8 567 72.5
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 4.9e-249 864.4 567 72.7
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 8.4e-249 863.6 567 72.7
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 1.1e-248 863.2 569 72.8
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 1.1e-248 863.2 571 73.9
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.1e-248 863.2 567 72.8
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 1.9e-248 862.4 567 72.5
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 2.5e-248 862.1 568 72.9
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 4.2e-248 861.3 568 72.9
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 7.1e-248 860.5 573 72.9
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 3.5e-247 858.2 589 72.5
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 1.8e-246 855.9 553 73.4
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 2.3e-246 855.5 571 73.0
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.3e-245 851.7 562 72.1
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 3.7e-244 848.2 532 78.4
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 1.4e-243 846.3 571 71.5
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 1.3e-241 839.7 547 73.3
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 5.0e-241 837.8 564 73.4
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 8.5e-241 837.0 570 71.9
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 1.5e-237 826.2 529 75.4
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 6.3e-236 820.8 566 71.6
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 3.8e-233 811.6 481 81.7
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 3.7e-228 795.0 558 70.3
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 1.7e-225 786.2 497 77.1
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 2.8e-220 768.8 620 64.0
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.8e-214 749.6 571 66.9
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 1.7e-212 743.0 448 79.5
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.4e-206 723.4 437 79.2
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 7.7e-202 707.6 434 79.0
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.6e-199 699.9 408 80.6
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 3.6e-199 698.7 439 77.2
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 5.4e-195 684.9 431 79.4
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 1.8e-187 659.8 576 57.3
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 3.1e-182 642.5 433 75.1
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 3.7e-180 635.6 427 75.9
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 3.1e-166 589.3 436 69.3
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 2.8e-159 566.2 583 52.5
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 8.4e-156 554.7 372 77.4
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 4.2e-155 552.4 541 54.2
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 1.5e-152 543.9 550 53.5
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.2e-125 454.5 579 42.1
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 1.2e-117 427.9 382 59.9
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-95 354.4 222 73.9
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 7.7e-93 345.5 280 66.8
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 8.5e-92 342.0 387 50.4
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 2.0e-88 330.9 586 39.9
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 4.8e-87 326.2 213 77.9
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 1.7e-84 317.8 223 65.0
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 7.5e-72 275.8 604 33.8
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 2.5e-67 260.8 580 33.3
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 2.3e-60 237.7 557 33.4
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.8e-56 223.0 151 74.8
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.3e-55 221.9 126 81.0
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.7e-55 221.5 148 75.7
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.6e-52 209.1 139 75.5
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 6.0e-45 186.4 97 83.5
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 9.9e-40 169.1 182 56.0
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.1e-38 165.6 106 75.5
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.6e-26 125.2 88 73.9
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.1e-25 122.5 74 79.7
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.5e-16 92.0 49 77.6
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 3.4e-16 90.9 50 78.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 5.8e-16 90.1 63 63.5
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 7.4e-11 73.2 59 67.8
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 4.2e-06 57.4 305 27.2


User provided reference genes

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