Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 7.4e-256 886.7 450 100.0
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 3.3e-179 632.1 474 69.0
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 1.3e-156 557.0 475 62.1
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 1.4e-153 547.0 476 62.8
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 3.8e-151 538.9 471 61.4
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 8.7e-148 527.7 465 61.9
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 2.4e-145 519.6 476 58.8
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 1.7e-143 513.5 423 63.1
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 1.4e-142 510.4 425 63.3
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 1.6e-141 506.9 478 59.0
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 1.0e-140 504.2 474 57.2
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 8.7e-140 501.1 461 60.3
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 8.4e-135 484.6 429 59.9
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 1.4e-134 483.8 421 60.3
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 2.5e-134 483.0 474 55.9
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 5.5e-134 481.9 421 59.9
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 7.1e-134 481.5 426 60.8
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 1.6e-133 480.3 433 60.0
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 1.0e-132 477.6 426 59.9
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 3.9e-132 475.7 426 59.2
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 8.7e-132 474.6 430 59.3
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 3.3e-131 472.6 448 58.0
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 9.6e-131 471.1 452 55.5
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.1e-130 469.9 452 55.5
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 2.4e-129 466.5 454 55.5
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 6.9e-129 464.9 449 57.0
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 3.4e-128 462.6 430 57.4
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 8.4e-127 458.0 480 55.2
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 3.2e-126 456.1 429 57.8
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 3.9e-124 449.1 436 56.4
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 3.4e-120 436.0 415 56.6
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 1.5e-115 420.6 378 58.5
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 1.5e-115 420.6 418 55.3
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 8.2e-114 414.8 426 53.8
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.1e-113 414.5 418 53.1
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 6.1e-109 398.7 376 58.2
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 3.0e-108 396.4 416 51.9
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.1e-105 387.9 304 64.8
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 1.4e-105 387.5 438 50.7
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 4.5e-88 329.3 439 46.2
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 8.5e-87 325.1 354 52.3
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 1.3e-82 311.2 427 44.0
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 2.3e-79 300.4 412 46.1
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 1.5e-70 271.2 309 52.4
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.5e-70 271.2 285 53.0
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 7.3e-70 268.9 260 58.5
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 3.5e-56 223.4 165 70.3
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 4.0e-52 209.9 186 58.6
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 8.9e-52 208.8 263 46.8
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 1.5e-51 208.0 180 60.6
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 4.9e-50 203.0 188 58.0
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 2.8e-45 187.2 231 51.5
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.3e-37 161.8 143 56.6
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 5.8e-35 152.9 185 48.1
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 3.2e-33 147.1 221 43.0
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 7.6e-27 125.9 254 40.9
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 4.9e-26 123.2 173 46.2
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 3.0e-23 114.0 89 65.2
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 5.1e-15 86.7 84 52.4
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 1.9e-14 84.7 65 64.6
Rhsim07G0028700 Rhododendron simsii HOM05D003566 ORTHO05D005288 3.4e-11 73.9 415 24.8
Lj3g0026165 Lotus japonicus HOM05D003566 ORTHO05D005288 7.6e-11 72.8 427 24.6
arahy.Tifrunner.gnm1.ann1.VTP8RR Arachis hypogaea HOM05D003566 ORTHO05D005288 2.9e-10 70.9 430 24.2
Sopen06g001050 Solanum pennellii HOM05D008293 ORTHO05D023155 1.1e-09 68.9 82 46.3
vmacro21022 Vaccinium macrocarpon HOM05D003566 ORTHO05D005288 1.4e-09 68.6 427 24.8
RcHm_v2.0_Chr5g0030641 Rosa chinensis HOM05D008293 ORTHO05D010504 7.1e-09 66.2 67 52.2
arahy.Tifrunner.gnm1.ann1.9A4JNA Arachis hypogaea HOM05D003566 ORTHO05D005288 9.3e-09 65.9 329 24.9
Nn1g01139 Nelumbo nucifera HOM05D003566 ORTHO05D005288 1.6e-08 65.1 432 25.0
Hund17028 Selenicereus undatus HOM05D003566 ORTHO05D005288 2.7e-08 64.3 332 24.7
Lsat_1_v5_gn_7_9680 Lactuca sativa HOM05D003566 ORTHO05D005288 3.5e-08 63.9 276 26.1
Cfa001747 Carpinus fangiana HOM05D003566 ORTHO05D005288 6.1e-08 63.2 471 23.4
Sabra14G0047900 Salix brachista HOM05D003566 ORTHO05D005288 1.0e-07 62.4 413 24.5
HanXRQChr04g0122731 Helianthus annuus HOM05D003566 ORTHO05D005288 1.3e-07 62.0 261 26.4
Hma1.2p1_0301F.1_g118610 Hydrangea macrophylla HOM05D003566 ORTHO05D005288 1.3e-07 62.0 261 25.7
DCAR_008553 Daucus carota HOM05D003566 ORTHO05D005288 5.1e-07 60.1 279 24.7
Sc23g0003670 Simmondsia chinensis HOM05D003566 ORTHO05D005288 5.1e-07 60.1 276 26.1
Dinv43695 Davidia involucrata HOM05D003566 ORTHO05D005288 5.7e-06 56.6 388 23.2
Lj9A568G56 Lonicera japonica HOM05D003566 ORTHO05D005288 7.4e-06 56.2 260 23.8


User provided reference genes

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