Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 9.9e-72 273.5 151 100.0
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.3e-52 209.9 152 80.3
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 2.3e-44 182.6 156 71.8
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 9.6e-43 177.2 137 78.1
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 4.8e-42 174.9 164 68.3
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.8e-42 174.9 145 72.4
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 4.8e-42 174.9 150 71.3
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 4.8e-42 174.9 156 67.3
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 8.2e-42 174.1 145 72.4
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.8e-41 172.9 159 69.2
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 3.1e-41 172.2 132 75.8
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.1e-41 171.8 133 75.2
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.2e-40 170.2 154 70.1
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 2.0e-40 169.5 156 68.6
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.0e-40 169.5 157 68.2
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.0e-40 169.5 133 74.4
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 2.0e-40 169.5 153 68.0
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 2.6e-40 169.1 154 69.5
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.6e-40 169.1 154 69.5
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 4.5e-40 168.3 112 81.2
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 5.9e-40 167.9 147 69.4
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 1.3e-39 166.8 163 68.7
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 3.8e-39 165.2 156 67.3
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.4e-38 163.3 154 67.5
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.9e-38 162.9 148 68.9
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 3.2e-38 162.2 139 68.3
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 3.2e-38 162.2 151 66.9
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 4.2e-38 161.8 151 66.2
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 9.3e-38 160.6 158 65.8
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 9.3e-38 160.6 158 65.8
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.2e-37 160.2 157 64.3
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.6e-37 159.8 151 65.6
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.6e-37 159.8 156 66.0
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 1.6e-37 159.8 197 56.3
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 6.1e-37 157.9 145 66.9
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 7.9e-37 157.5 151 66.9
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 1.8e-36 156.4 146 67.8
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 3.9e-36 155.2 157 65.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 3.9e-36 155.2 153 63.4
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 2.5e-35 152.5 163 63.8
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 3.3e-35 152.1 140 68.6
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 7.4e-35 151.0 151 63.6
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 1.6e-34 149.8 164 62.2
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 2.8e-34 149.1 169 61.5
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 2.8e-34 149.1 154 65.6
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 3.7e-34 148.7 158 61.4
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 3.7e-34 148.7 160 60.0
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 8.2e-34 147.5 133 69.2
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.1e-33 147.1 158 61.4
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.4e-33 146.7 156 60.9
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 1.8e-33 146.4 149 62.4
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 3.1e-33 145.6 140 67.9
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.1e-33 145.2 147 61.9
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.1e-33 145.2 147 61.9
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 5.3e-33 144.8 159 59.7
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 5.3e-33 144.8 159 61.0
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 5.3e-33 144.8 159 61.0
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 6.9e-33 144.4 160 60.0
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 9.1e-33 144.1 160 61.9
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 9.1e-33 144.1 157 60.5
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.2e-32 143.7 157 61.1
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 1.5e-32 143.3 134 67.9
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.0e-32 142.9 160 59.4
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 2.0e-32 142.9 155 63.2
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 2.0e-32 142.9 151 63.6
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 2.6e-32 142.5 161 61.5
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 4.5e-32 141.7 157 58.0
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 5.9e-32 141.4 160 60.0
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 7.7e-32 141.0 127 69.3
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.0e-31 140.6 156 60.9
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.0e-31 140.6 159 61.0
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.3e-31 140.2 138 65.2
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.7e-31 139.8 159 60.4
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.7e-31 139.8 158 61.4
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-31 139.0 161 60.2
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.9e-31 139.0 133 65.4
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 5.0e-31 138.3 160 58.1
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 5.0e-31 138.3 160 58.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 5.0e-31 138.3 153 59.5
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 5.0e-31 138.3 157 58.6
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 5.0e-31 138.3 150 60.0
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 1.1e-30 137.1 151 61.6
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.1e-30 137.1 141 63.8
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 2.5e-30 136.0 152 59.9
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 2.5e-30 136.0 152 59.9
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 2.5e-30 136.0 152 59.9
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 4.2e-30 135.2 161 60.2
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 5.5e-30 134.8 157 59.2
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 1.2e-29 133.7 129 67.4
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 2.7e-29 132.5 137 62.8
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 6.1e-29 131.3 134 61.2
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 6.1e-29 131.3 152 61.2
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-28 130.2 134 59.0
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 6.7e-28 127.9 138 58.7
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 8.8e-28 127.5 149 58.4
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 8.8e-28 127.5 160 56.2
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 3.3e-27 125.6 137 59.9
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 4.4e-27 125.2 147 60.5
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 1.3e-26 123.6 150 57.3
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.8e-26 122.5 79 82.3
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 4.8e-26 121.7 138 61.6
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 3.1e-25 119.0 156 53.8
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 6.9e-25 117.9 155 55.5
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 6.9e-25 117.9 154 56.5
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 2.0e-24 116.3 86 74.4
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 3.4e-24 115.5 158 55.1
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.0e-23 114.0 137 54.7
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 2.9e-23 112.5 71 84.5
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 2.9e-23 112.5 133 57.9
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 5.0e-23 111.7 95 66.3
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 8.5e-23 110.9 108 62.0
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 1.1e-22 110.5 157 52.9
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 1.9e-22 109.8 91 69.2
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 2.5e-22 109.4 100 63.0
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 9.4e-22 107.5 150 53.3
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 9.4e-22 107.5 150 53.3
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 9.4e-22 107.5 93 67.7
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 1.8e-20 103.2 64 84.4
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 6.7e-20 101.3 64 87.5
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 1.3e-15 87.0 115 50.4
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 6.5e-15 84.7 59 79.7
Nn1g04376 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.9e-14 83.2 78 65.4
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.5e-14 82.8 126 51.6
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 7.2e-14 81.3 134 50.7
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.2e-13 80.5 106 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 1.0e-12 77.4 123 52.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 5.2e-12 75.1 83 60.2
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 8.8e-12 74.3 116 50.9
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 5.3e-09 65.1 46 78.3
PRCOL_00001665 Prasinoderma coloniale HOM05D005954 ORTHO05D007347 9.4e-06 54.3 89 51.7


User provided reference genes

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