Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.5e-153 545.4 276 100.0
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 2.1e-120 436.0 262 83.2
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.0e-119 433.7 260 83.5
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.8e-119 433.0 256 85.2
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 2.3e-119 432.6 262 82.1
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 2.3e-119 432.6 258 85.7
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 6.8e-119 431.0 262 82.8
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 1.1e-116 423.7 261 81.6
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.8e-116 422.9 257 82.5
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 2.4e-116 422.5 253 83.8
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 4.1e-116 421.8 257 80.9
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 5.4e-116 421.4 261 80.8
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 5.4e-116 421.4 261 81.2
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 1.2e-115 420.2 258 80.6
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.6e-115 419.9 261 80.8
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 1.6e-115 419.9 262 80.5
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 2.0e-115 419.5 261 81.2
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 4.5e-115 418.3 261 81.6
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 4.5e-115 418.3 261 81.2
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 5.9e-115 417.9 261 81.6
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 1.3e-114 416.8 260 81.9
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 2.3e-114 416.0 261 80.5
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.9e-114 415.6 259 81.1
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 8.6e-114 414.1 261 80.5
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 2.5e-113 412.5 261 80.1
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 3.3e-113 412.1 262 79.8
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 4.3e-113 411.8 261 80.8
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 4.3e-113 411.8 261 80.8
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 4.3e-113 411.8 260 81.2
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 9.5e-113 410.6 262 78.2
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 9.5e-113 410.6 258 79.5
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 1.2e-112 410.2 262 79.0
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 1.6e-112 409.8 262 78.6
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.1e-112 409.5 261 80.1
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 8.0e-112 407.5 260 80.4
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 1.8e-111 406.4 257 79.4
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 2.3e-111 406.0 262 80.9
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 3.0e-111 405.6 260 78.5
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 3.0e-111 405.6 257 78.6
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 5.2e-111 404.8 257 80.2
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 2.0e-110 402.9 257 78.2
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 3.4e-110 402.1 262 78.2
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 1.7e-109 399.8 259 79.5
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 2.9e-109 399.1 303 70.3
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 2.9e-109 399.1 257 78.6
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 1.4e-108 396.7 257 79.8
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 7.0e-108 394.4 230 86.1
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 2.0e-107 392.9 255 76.9
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 1.0e-106 390.6 244 80.3
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 9.5e-105 384.0 257 77.0
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 1.1e-103 380.6 262 74.4
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 6.8e-103 377.9 253 76.7
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 1.2e-102 377.1 229 83.8
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 2.0e-102 376.3 222 84.2
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 2.6e-102 375.9 299 66.2
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 7.5e-102 374.4 257 75.1
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 7.5e-102 374.4 253 76.3
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 1.3e-101 373.6 226 82.7
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 1.7e-101 373.2 257 75.1
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 3.7e-101 372.1 257 74.7
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 3.7e-101 372.1 257 75.1
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 4.9e-101 371.7 257 74.3
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 6.4e-101 371.3 257 74.7
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.4e-100 370.2 257 75.1
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 1.9e-100 369.8 257 75.1
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 1.9e-100 369.8 261 73.6
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 4.1e-100 368.6 284 69.0
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 7.0e-100 367.9 257 73.9
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 7.0e-100 367.9 232 79.3
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 7.0e-100 367.9 232 79.3
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.6e-99 366.7 228 82.0
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.3e-98 363.6 291 66.3
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 6.6e-98 361.3 280 69.3
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 8.6e-98 360.9 280 69.3
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 8.6e-98 360.9 396 54.3
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 2.5e-97 359.4 223 82.1
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 5.6e-97 358.2 285 68.4
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 4.4e-94 348.6 257 70.8
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 5.4e-92 341.7 262 70.6
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 2.1e-91 339.7 261 69.7
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 6.6e-90 334.7 259 68.3
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.1e-89 334.0 205 83.9
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 2.4e-87 326.2 535 41.5
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 8.9e-87 324.3 203 77.3
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 4.9e-85 318.5 262 63.7
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.1e-84 317.4 261 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 2.4e-84 316.2 263 61.6
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 5.4e-84 315.1 207 75.8
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 6.6e-82 308.1 253 63.2
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 1.8e-79 300.1 173 87.3
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 5.8e-78 295.0 267 59.2
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 5.4e-76 288.5 185 75.7
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 9.3e-76 287.7 185 74.6
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 4.6e-75 285.4 293 56.3
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 3.0e-74 282.7 260 60.4
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 4.3e-73 278.9 189 75.7
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 6.0e-67 258.5 156 84.0
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 3.2e-60 236.1 141 83.0
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 9.3e-60 234.6 266 47.0
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 6.0e-59 231.9 260 49.6
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 9.0e-55 218.0 162 69.1
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 2.0e-54 216.9 201 61.2
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 1.2e-51 207.6 165 68.5
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 3.5e-51 206.1 133 78.9
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 6.0e-51 205.3 325 40.0
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 2.5e-44 183.3 124 74.2
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 7.2e-44 181.8 107 86.9
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 7.4e-33 145.2 144 53.5
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 1.1e-31 141.4 78 87.2
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 2.3e-26 123.6 108 61.1
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 6.3e-24 115.5 73 78.1
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 5.0e-21 105.9 65 84.6
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 6.5e-21 105.5 160 45.0
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 8.5e-21 105.1 181 40.9
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 6.1e-19 99.0 62 83.9
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 6.1e-19 99.0 62 83.9
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 6.1e-19 99.0 62 83.9
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.2e-17 94.7 53 90.6
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 2.0e-17 94.0 53 90.6
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.7e-16 90.9 51 90.2
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 2.8e-16 90.1 58 77.6
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 3.1e-15 86.7 57 82.5
CDE04G0254 Ceratophyllum demersum HOM05D001182 ORTHO05D008051 3.1e-07 60.1 36 72.2
RcHm_v2.0_Chr5g0010491 Rosa chinensis HOM05D005057 ORTHO05D006570 9.1e-07 58.5 148 31.8


User provided reference genes

Program Settings