Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.0e-82 308.1 165 100.0
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 3.5e-14 82.4 87 48.3
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 6.0e-14 81.6 87 42.5
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 7.9e-14 81.3 87 46.0
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.0e-13 80.9 87 42.5
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.8e-13 80.1 87 42.5
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 2.3e-13 79.7 87 46.0
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.3e-13 79.7 87 46.0
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 1.1e-12 77.4 83 45.8
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.5e-12 77.0 86 45.3
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 1.9e-12 76.6 86 43.0
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 2.5e-12 76.3 84 40.5
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 2.5e-12 76.3 83 44.6
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 7.4e-12 74.7 89 41.6
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 2.8e-11 72.8 87 43.7
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 3.7e-11 72.4 84 41.7
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 4.8e-11 72.0 80 40.0
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.8e-11 72.0 88 44.3
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 4.8e-11 72.0 90 38.9
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.1e-10 70.9 87 42.5
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.8e-10 70.1 89 37.1
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.8e-10 70.1 83 41.0
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.8e-10 70.1 83 41.0
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 2.4e-10 69.7 84 40.5
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 4.0e-10 68.9 92 39.1
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 5.3e-10 68.6 84 36.9
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 5.3e-10 68.6 91 36.3
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 5.3e-10 68.6 91 36.3
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 6.9e-10 68.2 85 40.0
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 6.9e-10 68.2 87 40.2
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 9.0e-10 67.8 90 37.8
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 1.2e-09 67.4 90 37.8
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 1.2e-09 67.4 87 40.2
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.2e-09 67.4 84 41.7
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 1.5e-09 67.0 85 37.6
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 1.5e-09 67.0 85 37.6
Prupe.6G152600 Prunus persica HOM05D002652 ORTHO05D002739 1.5e-09 67.0 82 43.9
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 1.5e-09 67.0 84 36.9
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 2.0e-09 66.6 84 39.3
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.0e-09 66.6 84 38.1
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 2.6e-09 66.2 85 38.8
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 3.4e-09 65.9 85 37.6
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 3.4e-09 65.9 85 37.6
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 3.4e-09 65.9 85 37.6
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.4e-09 65.9 88 38.6
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 3.4e-09 65.9 84 39.3
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.4e-09 65.9 92 32.6
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 4.5e-09 65.5 85 37.6
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 4.5e-09 65.5 86 37.2
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 5.8e-09 65.1 84 38.1
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.8e-09 65.1 86 34.9
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 5.8e-09 65.1 83 41.0
DCAR_030374 Daucus carota HOM05D002652 ORTHO05D002739 1.0e-08 64.3 89 38.2
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.0e-08 64.3 87 40.2
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 1.0e-08 64.3 110 34.5
DCAR_030377 Daucus carota HOM05D002652 ORTHO05D002739 2.2e-08 63.2 101 34.7
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 2.9e-08 62.8 84 35.7
Nn1g06038 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.9e-08 62.8 69 43.5
DCAR_030376 Daucus carota HOM05D002652 ORTHO05D002739 6.5e-08 61.6 72 43.1
RcHm_v2.0_Chr4g0395741 Rosa chinensis HOM05D002652 ORTHO05D002739 6.5e-08 61.6 87 39.1
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 8.4e-08 61.2 88 36.4
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 8.4e-08 61.2 90 36.7
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 8.4e-08 61.2 90 35.6
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 8.4e-08 61.2 84 38.1
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 8.4e-08 61.2 88 36.4
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 8.4e-08 61.2 88 34.1
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 8.4e-08 61.2 88 36.4
DCAR_030375 Daucus carota HOM05D002652 ORTHO05D002739 1.1e-07 60.8 89 34.8
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.1e-07 60.8 90 35.6
TAR636G2060 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.1e-07 60.8 84 35.7
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.4e-07 60.5 63 46.0
Aa31LG7G1670 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.4e-07 60.5 63 46.0
Migut.N00305 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.4e-07 60.5 84 34.5
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 1.4e-07 60.5 88 35.2
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.5e-07 59.7 88 31.8
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 3.2e-07 59.3 90 32.2
MSTRG.4180 Avicennia marina HOM05D002652 ORTHO05D002739 3.2e-07 59.3 102 30.4
Sabra11G0121600 Salix brachista HOM05D002652 ORTHO05D002739 3.2e-07 59.3 88 36.4
TAR636G0198 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.2e-07 59.3 75 41.3
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 4.2e-07 58.9 92 35.9
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.2e-07 58.9 88 36.4
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.2e-07 58.9 84 34.5
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 4.2e-07 58.9 87 35.6
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.5e-07 58.5 85 35.3
RcHm_v2.0_Chr4g0395571 Rosa chinensis HOM05D002652 ORTHO05D002739 5.5e-07 58.5 87 35.6
Prupe.7G106800 Prunus persica HOM05D002652 ORTHO05D002739 7.1e-07 58.2 103 34.0
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.1e-07 58.2 89 31.5
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 7.1e-07 58.2 84 34.5
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 9.3e-07 57.8 89 33.7
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.3e-07 57.8 89 31.5
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.2e-06 57.4 55 49.1
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 1.2e-06 57.4 93 34.4
Migut.N00889 Erythranthe guttata HOM05D002652 ORTHO05D002739 1.2e-06 57.4 85 36.5
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.6e-06 57.0 84 33.3
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.6e-06 57.0 89 31.5
Potri.019G029100 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-06 57.0 88 36.4
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 2.1e-06 56.6 99 29.3
Potri.019G026740 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.1e-06 56.6 98 32.7
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 2.7e-06 56.2 84 32.1
Aa31LG7G1750 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.7e-06 56.2 99 32.3
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.7e-06 56.2 89 30.3
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 2.7e-06 56.2 83 36.1
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.7e-06 56.2 77 35.1
Sabra19G0035200 Salix brachista HOM05D002652 ORTHO05D002739 2.7e-06 56.2 88 35.2
Sabra19G0035400 Salix brachista HOM05D002652 ORTHO05D002739 2.7e-06 56.2 88 35.2
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.5e-06 55.8 88 34.1
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.6e-06 55.5 99 32.3
Migut.N00887 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.6e-06 55.5 84 35.7
Rhsim02G0047000 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.6e-06 55.5 88 35.2
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 6.0e-06 55.1 89 37.1
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 6.0e-06 55.1 88 34.1
MSTRG.4182 Avicennia marina HOM05D002652 ORTHO05D002739 7.9e-06 54.7 89 31.5
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 7.9e-06 54.7 78 34.6
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 7.9e-06 54.7 89 34.8
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 7.9e-06 54.7 88 31.8
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 7.9e-06 54.7 88 31.8
Oeu011206.1 Olea europaea HOM05D002652 ORTHO05D002739 7.9e-06 54.7 86 29.1
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 7.9e-06 54.7 55 47.3


User provided reference genes

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