Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 4.6e-247 857.4 431 100.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 5.3e-179 631.3 433 72.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.9e-168 596.3 405 72.8
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.6e-167 593.2 371 76.8
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.7e-167 592.4 366 76.8
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.6e-167 592.0 370 77.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.0e-166 590.5 367 77.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 4.0e-166 588.6 395 71.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.4e-165 585.5 368 76.6
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.7e-164 582.0 405 71.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.1e-163 580.5 369 73.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.4e-163 580.1 397 70.8
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.4e-163 579.3 416 68.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 5.4e-163 578.2 391 72.6
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.5e-162 575.1 407 70.5
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.3e-161 572.8 418 67.2
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 5.0e-161 571.6 389 71.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.6e-161 571.2 423 67.8
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.6e-161 571.2 388 71.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.1e-160 570.5 399 69.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.9e-160 569.7 370 73.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.9e-160 569.7 394 71.6
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.2e-160 567.8 389 70.2
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.6e-159 566.6 375 71.2
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.1e-159 566.2 364 73.4
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 6.1e-159 564.7 403 68.5
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.8e-158 563.1 420 65.7
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 6.8e-158 561.2 364 72.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 9.8e-157 557.4 376 72.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 9.8e-157 557.4 370 70.8
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.2e-156 556.2 364 72.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.2e-156 556.2 362 71.5
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 4.9e-156 555.1 371 69.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 6.3e-156 554.7 368 72.0
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.8e-155 553.1 368 71.2
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.8e-155 553.1 359 73.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 4.1e-155 552.0 368 71.7
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 4.1e-155 552.0 403 68.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 7.0e-155 551.2 369 71.0
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.2e-154 550.4 368 72.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.2e-154 550.4 372 70.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.6e-154 550.1 405 64.9
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.0e-154 549.7 364 71.4
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 3.5e-154 548.9 363 70.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 5.9e-154 548.1 369 70.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 7.8e-154 547.7 364 71.2
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.3e-153 547.0 370 70.5
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.3e-153 547.0 386 66.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.7e-153 546.6 364 71.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.7e-153 546.6 539 54.5
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.3e-153 546.2 367 71.4
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 3.9e-153 545.4 369 70.2
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 6.6e-153 544.7 370 71.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.3e-152 542.3 394 68.5
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.1e-151 539.7 359 71.0
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.8e-151 539.3 370 70.3
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.1e-150 535.8 363 71.1
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.0e-150 535.4 379 68.6
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 7.5e-149 531.2 411 65.7
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.9e-148 528.5 378 68.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 6.4e-148 528.1 385 65.7
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.1e-147 525.4 431 63.8
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 9.2e-147 524.2 345 71.6
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.6e-146 523.5 363 68.3
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 5.0e-145 518.5 423 61.9
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 8.6e-145 517.7 429 62.5
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 9.5e-144 514.2 366 69.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.6e-143 513.5 393 66.4
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.1e-143 513.1 351 70.7
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 8.0e-143 511.1 394 64.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 4.0e-142 508.8 377 65.8
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 8.9e-142 507.7 372 66.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 4.4e-141 505.4 361 67.3
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.4e-141 505.4 364 67.0
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.7e-140 503.4 389 64.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-138 496.9 387 65.1
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.7e-138 496.1 364 66.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.5e-138 495.7 392 64.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.9e-136 490.0 357 65.0
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.3e-136 489.2 345 69.0
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.2e-125 454.1 353 64.3
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.1e-123 447.6 304 71.4
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.3e-121 440.7 331 63.1
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.3e-121 439.9 357 57.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.4e-117 426.0 434 53.7
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.6e-111 407.1 368 58.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.4e-108 394.8 356 53.7
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 7.1e-107 391.7 345 56.5
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-102 377.1 326 55.5
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.8e-102 377.1 393 53.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.1e-99 367.9 234 72.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.2e-99 366.3 234 72.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.1e-95 353.6 413 49.2
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.3e-89 334.3 286 58.4
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 5.9e-85 318.9 317 52.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 5.9e-69 265.8 371 39.9
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.7e-64 249.2 358 43.9
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.1e-51 208.4 134 76.1
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.2e-49 199.5 129 72.9
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 8.0e-42 175.6 183 51.4
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-41 173.7 130 65.4
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 2.2e-39 167.5 108 71.3
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.5e-27 127.5 125 54.4
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 8.1e-26 122.5 79 68.4
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 8.1e-26 122.5 129 53.5
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 2.0e-24 117.9 112 51.8
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.2e-21 108.6 58 82.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.7e-21 107.5 168 39.3
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 6.0e-21 106.3 375 27.2
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 4.0e-17 93.6 77 57.1
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 3.4e-16 90.5 99 44.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.7e-13 80.9 62 62.9
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 7.8e-13 79.3 329 24.3
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-12 78.6 52 71.2
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.5e-11 75.1 177 33.3
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.5e-11 74.3 58 65.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.6e-10 70.5 50 58.0
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 5.4e-06 56.6 32 71.9


User provided reference genes

Program Settings