Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 4.4e-141 504.6 254 100.0
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 9.9e-125 450.3 232 100.0
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 7.0e-54 214.9 280 51.4
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 7.3e-51 204.9 283 47.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 8.9e-49 198.0 305 45.2
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.5e-48 197.2 283 44.9
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 2.6e-48 196.4 245 49.0
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 5.8e-48 195.3 306 44.1
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 9.8e-48 194.5 267 49.1
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 1.7e-47 193.7 305 42.3
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.2e-47 193.4 283 44.2
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 8.3e-47 191.4 283 44.2
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.4e-46 190.7 305 43.6
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.9e-46 190.3 305 43.9
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.2e-46 189.5 305 43.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 3.2e-46 189.5 305 43.0
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 4.1e-46 189.1 278 44.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 9.2e-46 188.0 283 44.2
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.6e-45 187.2 308 42.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 1.6e-45 187.2 305 42.0
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 3.5e-45 186.0 323 41.5
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 6.0e-45 185.3 304 42.8
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 1.0e-44 184.5 283 43.5
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.3e-44 184.1 305 42.0
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.3e-44 184.1 305 43.9
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.3e-44 184.1 305 43.6
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.7e-44 183.7 304 42.4
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 3.9e-44 182.6 305 40.7
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 8.6e-44 181.4 283 42.8
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 8.6e-44 181.4 305 43.3
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.1e-43 181.0 263 45.6
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.9e-43 180.3 283 42.8
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 2.5e-43 179.9 305 42.0
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.5e-43 179.9 306 42.2
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 3.3e-43 179.5 283 43.5
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 4.3e-43 179.1 283 43.1
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 7.3e-43 178.3 283 42.4
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 9.5e-43 177.9 306 43.1
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 9.5e-43 177.9 305 40.3
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 9.5e-43 177.9 306 40.2
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 2.8e-42 176.4 283 43.1
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.6e-42 176.0 283 43.1
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 3.6e-42 176.0 283 43.8
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.6e-42 176.0 278 43.5
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 3.6e-42 176.0 283 42.4
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 4.7e-42 175.6 284 43.0
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 4.7e-42 175.6 305 41.6
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 8.1e-42 174.9 305 40.7
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 8.1e-42 174.9 284 43.0
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.1e-41 174.5 305 42.0
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.4e-41 174.1 283 42.8
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.3e-41 173.3 305 39.7
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 2.3e-41 173.3 342 38.9
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 3.1e-41 172.9 307 41.7
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.2e-41 172.2 284 42.3
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 5.2e-41 172.2 284 41.9
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 8.9e-41 171.4 305 38.0
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.2e-40 171.0 278 42.4
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.2e-40 171.0 278 42.1
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.0e-40 170.2 281 42.0
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 2.6e-40 169.9 283 39.2
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.4e-40 169.1 283 41.3
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 4.4e-40 169.1 283 40.6
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 5.8e-40 168.7 289 40.8
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 9.8e-40 167.9 256 43.0
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.3e-39 167.5 305 40.0
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.7e-39 167.2 278 41.0
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 4.9e-39 165.6 305 39.7
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 4.9e-39 165.6 287 41.1
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 6.4e-39 165.2 282 41.1
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 6.4e-39 165.2 283 40.6
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.1e-38 164.5 347 38.3
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.4e-38 164.1 305 39.3
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.4e-38 164.1 305 39.0
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.4e-38 164.1 305 38.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.9e-38 163.7 283 39.9
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 4.1e-38 162.5 305 39.0
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 4.1e-38 162.5 305 39.0
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 4.1e-38 162.5 305 38.7
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 4.1e-38 162.5 305 38.7
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 4.1e-38 162.5 305 39.0
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 5.1e-36 155.6 285 42.1
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.6e-36 155.2 278 39.2
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.1e-35 154.5 301 37.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 9.5e-35 151.4 342 33.9
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.4e-33 147.5 344 35.5
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 3.1e-33 146.4 218 43.1
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.9e-32 141.4 178 50.6
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 6.0e-29 132.1 143 54.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.0e-28 131.3 289 35.3
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.3e-28 131.0 288 36.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 5.6e-27 125.6 218 39.4
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 7.3e-27 125.2 284 33.8
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 3.6e-26 122.9 143 52.4
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.3e-23 114.4 138 51.4
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 2.9e-23 113.2 286 31.1
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.1e-22 111.3 186 40.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.9e-22 110.5 192 39.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.3e-15 87.8 283 26.5
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 3.8e-15 86.3 72 62.5
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 4.9e-15 85.9 69 63.8
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 8.4e-15 85.1 315 26.0
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 9.3e-14 81.6 338 26.6
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.1e-13 80.5 69 55.1
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.1e-12 75.9 286 24.8
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.1e-12 75.9 258 27.1
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 2.5e-11 73.6 96 45.8
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.1e-10 70.5 113 46.0
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 3.6e-10 69.7 114 43.9
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.2e-08 64.7 298 24.2
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.7e-07 60.8 67 49.3


User provided reference genes

Program Settings