Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 1.2e-189 666.4 332 100.0
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 2.4e-142 509.2 322 79.5
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.7e-137 493.0 322 76.4
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.3e-129 466.8 322 73.0
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 6.9e-126 454.5 310 74.2
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.2e-125 453.8 326 71.2
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.6e-125 451.1 337 68.5
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.7e-124 449.9 309 75.1
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 4.2e-123 445.3 319 71.2
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.2e-122 443.7 327 70.9
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 1.2e-122 443.7 321 70.7
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 2.7e-122 442.6 297 74.7
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 5.1e-121 438.3 316 70.3
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 1.9e-120 436.4 317 68.8
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 8.2e-119 431.0 315 70.2
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 1.8e-118 429.9 290 71.7
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.8e-118 429.9 276 75.7
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.4e-118 429.5 318 71.4
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.0e-118 428.7 264 79.2
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.2e-117 427.2 314 69.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.5e-117 426.8 321 70.1
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.5e-117 426.8 314 69.7
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.5e-117 426.8 314 69.7
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 3.4e-117 425.6 312 69.2
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 7.6e-117 424.5 297 71.0
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.0e-116 424.1 315 69.2
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.3e-116 423.7 273 76.6
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 1.7e-116 423.3 278 76.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 2.9e-116 422.5 319 68.7
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 2.9e-116 422.5 334 67.1
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 8.4e-116 421.0 314 69.1
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.9e-115 419.9 316 69.3
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 9.3e-115 417.5 292 72.6
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.1e-114 416.4 319 68.3
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 2.1e-114 416.4 285 73.3
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 4.6e-114 415.2 311 68.2
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 6.0e-114 414.8 327 67.6
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 7.9e-114 414.5 327 67.6
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 1.3e-113 413.7 293 72.7
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.3e-113 413.7 315 68.6
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 8.7e-113 411.0 290 67.6
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.5e-112 410.2 276 73.6
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 9.7e-112 407.5 310 70.0
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.3e-111 407.1 325 66.2
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.7e-111 405.6 326 66.3
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 3.7e-111 405.6 357 60.5
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 8.2e-111 404.4 327 66.7
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.1e-110 404.1 326 66.3
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.4e-110 403.7 255 77.3
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.8e-110 403.3 321 68.5
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.3e-110 401.7 327 66.1
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 6.9e-110 401.4 325 66.2
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 9.0e-110 401.0 280 72.9
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 8.5e-108 394.4 332 65.4
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.4e-107 393.7 309 67.0
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 3.2e-107 392.5 310 66.1
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 9.3e-107 391.0 286 71.7
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 1.6e-106 390.2 318 65.7
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.0e-105 387.5 323 65.3
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 3.0e-105 386.0 256 75.4
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 3.9e-105 385.6 279 69.5
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.5e-104 383.6 345 62.0
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 3.3e-104 382.5 257 75.5
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 3.3e-104 382.5 324 66.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 5.7e-104 381.7 314 62.7
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 7.4e-104 381.3 327 65.1
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 9.7e-104 380.9 232 78.9
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 1.7e-103 380.2 311 65.9
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 4.8e-103 378.6 316 65.5
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 6.3e-103 378.3 270 69.6
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 6.3e-103 378.3 290 67.6
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 1.8e-102 376.7 286 66.1
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 2.4e-102 376.3 315 62.5
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 4.1e-102 375.6 286 66.4
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 3.4e-101 372.5 319 62.4
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 4.5e-101 372.1 319 62.7
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.2e-100 369.8 318 61.3
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 6.5e-100 368.2 303 63.0
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.1e-99 367.5 320 61.9
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 4.2e-99 365.5 317 61.8
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 4.2e-99 365.5 299 63.2
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.2e-98 364.0 277 68.6
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 4.7e-98 362.1 304 62.8
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 4.7e-98 362.1 304 62.8
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.6e-96 356.3 300 63.7
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 2.6e-96 356.3 304 62.2
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 3.3e-96 355.9 258 70.5
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 6.3e-95 351.7 265 68.7
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-94 349.7 221 77.4
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-92 342.4 219 77.2
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 5.0e-92 342.0 319 58.3
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.5e-91 339.7 273 66.7
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.8e-89 333.6 197 81.7
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.5e-83 313.2 176 84.7
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.2e-80 304.3 176 84.1
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.3e-80 302.8 237 67.9
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 7.5e-80 301.6 236 64.4
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.1e-78 297.7 284 56.3
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 7.0e-78 295.0 286 55.6
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 5.9e-77 292.0 225 66.2
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.2e-75 285.8 236 66.9
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.3e-71 271.9 187 72.7
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 8.0e-66 255.0 202 61.4
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.8e-65 253.8 230 58.3
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 6.8e-65 251.9 232 60.3
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 5.7e-64 248.8 196 61.7
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 2.0e-56 223.8 210 54.3
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 8.9e-49 198.4 234 47.9
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.4e-46 191.0 164 59.1
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.2e-42 177.9 202 45.0
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 8.1e-42 175.3 125 67.2
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.1e-41 174.9 206 46.1
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.6e-34 149.8 90 80.0
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.6e-32 143.7 99 72.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 2.7e-29 133.7 87 75.9
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 1.7e-28 131.0 120 51.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.9e-27 127.5 190 45.3
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 4.4e-24 116.3 60 91.7
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 1.6e-10 71.2 122 45.9
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 4.0e-09 66.6 37 81.1
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 4.0e-09 66.6 144 32.6
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 7.1e-06 55.8 26 88.5


User provided reference genes

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