Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08776 Nelumbo nucifera HOM05D005920 ORTHO05D007211 4.4e-71 271.2 134 100.0
Nn1g08784 Nelumbo nucifera HOM05D005920 ORTHO05D007211 2.1e-57 225.7 112 100.0
Dinv07224 Davidia involucrata HOM05D005920 ORTHO05D007211 6.2e-33 144.4 112 63.4
TAR376G1095 Trochodendron aralioides HOM05D005920 ORTHO05D007211 4.0e-32 141.7 112 65.2
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 7.5e-31 137.5 115 60.9
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 4.9e-30 134.8 110 60.0
PSO528G0030 Papaver somniferum HOM05D005920 ORTHO05D007211 3.0e-27 125.6 112 58.9
TWI56G1135 Tripterygium wilfordii HOM05D005920 ORTHO05D007211 1.2e-25 120.2 112 55.4
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 2.8e-25 119.0 110 58.2
QL09p034934 Quercus lobata HOM05D005920 ORTHO05D007211 1.4e-24 116.7 106 56.6
vmacro00831 Vaccinium macrocarpon HOM05D005920 ORTHO05D007211 1.8e-24 116.3 112 56.2
CANSAT25G3381 Cannabis sativa HOM05D005920 ORTHO05D007211 5.2e-24 114.8 111 55.9
Prupe.1G499100 Prunus persica HOM05D005920 ORTHO05D007211 1.2e-23 113.6 104 55.8
Aqoxy6G00210 Aquilegia oxysepala HOM05D005920 ORTHO05D007211 4.4e-23 111.7 120 50.0
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum HOM05D005920 ORTHO05D007211 5.8e-23 111.3 109 53.2
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum HOM05D005920 ORTHO05D007211 5.8e-23 111.3 109 53.2
Actinidia29463 Actinidia chinensis HOM05D005920 ORTHO05D007211 1.7e-22 109.8 101 57.4
HPP92_011946 Vanilla planifolia HOM05D005920 ORTHO05D007211 1.7e-22 109.8 71 70.4
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 4.9e-22 108.2 111 48.6
ATR0584G080 Amborella trichopoda HOM05D005920 ORTHO05D007211 6.4e-22 107.8 112 50.9
RcHm_v2.0_Chr6g0295691 Rosa chinensis HOM05D005920 ORTHO05D007211 8.3e-22 107.5 109 51.4
Duzib093G1431 Durio zibethinus HOM05D005920 ORTHO05D007211 1.4e-21 106.7 111 49.5
MD15G1349900 Malus domestica HOM05D005920 ORTHO05D007211 4.1e-21 105.1 105 53.3
Aa31LG9G14240 Aethionema arabicum HOM05D005920 ORTHO05D007211 5.4e-21 104.8 121 47.9
Thecc.08G124700 Theobroma cacao HOM05D005920 ORTHO05D007211 5.4e-21 104.8 110 50.0
Potri.005G177400 Populus trichocarpa HOM05D005920 ORTHO05D007211 7.1e-21 104.4 97 52.6
Gohir.A06G044066 Gossypium hirsutum HOM05D005920 ORTHO05D007211 9.2e-21 104.0 110 50.0
Gorai.009G245500 Gossypium raimondii HOM05D005920 ORTHO05D007211 2.1e-20 102.8 102 52.9
Gohir.D05G237100 Gossypium hirsutum HOM05D005920 ORTHO05D007211 2.7e-20 102.4 102 52.0
Gorai.010G050100 Gossypium raimondii HOM05D005920 ORTHO05D007211 2.7e-20 102.4 110 49.1
Gohir.A05G234800 Gossypium hirsutum HOM05D005920 ORTHO05D007211 4.6e-20 101.7 102 52.0
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 6.0e-20 101.3 113 52.2
AL6G42090 Arabidopsis lyrata HOM05D005920 ORTHO05D007211 1.3e-19 100.1 105 53.3
Gohir.D06G045000 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.7e-19 99.8 110 48.2
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 2.3e-19 99.4 114 51.8
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 2.3e-19 99.4 128 45.3
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 3.0e-19 99.0 88 51.1
Sc02g0006050 Simmondsia chinensis HOM05D005920 ORTHO05D007211 8.6e-19 97.4 132 43.2
Cc10_g11840 Coffea canephora HOM05D005920 ORTHO05D007211 1.1e-18 97.1 104 50.0
Eucgr.F03788 Eucalyptus grandis HOM05D005920 ORTHO05D007211 1.5e-18 96.7 107 48.6
CAN.G127.17 Capsicum annuum HOM05D005920 ORTHO05D007211 1.9e-18 96.3 102 52.0
Thhalv10028662m.g Eutrema salsugineum HOM05D005920 ORTHO05D007211 1.9e-18 96.3 127 44.9
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.9e-18 96.3 118 47.5
AT4G08320 Arabidopsis thaliana HOM05D005920 ORTHO05D007211 3.3e-18 95.5 78 62.8
CARHR259410 Cardamine hirsuta HOM05D005920 ORTHO05D007211 3.3e-18 95.5 120 48.3
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 4.3e-18 95.1 103 52.4
Hund26813 Selenicereus undatus HOM05D005920 ORTHO05D007211 4.3e-18 95.1 97 51.5
CSS0013202 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 5.6e-18 94.7 91 54.9
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 5.6e-18 94.7 116 47.4
EL10Ac1g01005 Beta vulgaris HOM05D005920 ORTHO05D007211 7.3e-18 94.4 110 46.4
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 7.3e-18 94.4 117 45.3
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 9.5e-18 94.0 118 46.6
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 1.2e-17 93.6 118 45.8
Zm00001eb076340 Zea mays HOM05D005920 ORTHO05D007211 2.8e-17 92.4 100 52.0
Lalb_Chr10g0101741 Lupinus albus HOM05D005920 ORTHO05D007211 4.7e-17 91.7 100 49.0
Sed0014256 Sechium edule HOM05D005920 ORTHO05D007211 6.2e-17 91.3 111 44.1
Solyc11g012900.3 Solanum lycopersicum HOM05D005920 ORTHO05D007211 8.1e-17 90.9 102 50.0
ClCG11G015770 Citrullus lanatus HOM05D005920 ORTHO05D007211 1.1e-16 90.5 89 49.4
CsaV3_4G028230 Cucumis sativus L. HOM05D005920 ORTHO05D007211 2.3e-16 89.4 130 40.0
Lsat_1_v5_gn_6_112921 Lactuca sativa HOM05D005920 ORTHO05D007211 2.3e-16 89.4 112 44.6
Psat6g041000 Pisum sativum HOM05D005920 ORTHO05D007211 2.3e-16 89.4 107 47.7
MELO3C010480.2 Cucumis melo HOM05D005920 ORTHO05D007211 4.0e-16 88.6 130 40.0
Sopen11g007640 Solanum pennellii HOM05D005920 ORTHO05D007211 4.0e-16 88.6 102 49.0
arahy.Tifrunner.gnm1.ann1.QU4SLQ Arachis hypogaea HOM05D005920 ORTHO05D007211 6.8e-16 87.8 97 49.5
Os04g0690300 Oryza sativa ssp. japonica HOM05D005920 ORTHO05D007211 6.8e-16 87.8 72 59.7
Medtr1g030300 Medicago truncatula HOM05D005920 ORTHO05D007211 8.9e-16 87.4 111 46.8
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 1.2e-15 87.0 106 42.5
Sp6g09620 Schrenkiella parvula HOM05D005920 ORTHO05D007211 1.5e-15 86.7 114 44.7
Actinidia03473 Actinidia chinensis HOM05D005920 ORTHO05D007211 2.6e-15 85.9 55 72.7
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea HOM05D005920 ORTHO05D007211 2.6e-15 85.9 97 48.5
Glyma.14G149300 Glycine max HOM05D005920 ORTHO05D007211 4.4e-15 85.1 95 48.4
Oeu017295.1 Olea europaea HOM05D005920 ORTHO05D007211 4.4e-15 85.1 103 45.6
TPR.G25796 Trifolium pratense HOM05D005920 ORTHO05D007211 4.4e-15 85.1 109 45.9
VMungo0647G0482 Vigna mungo HOM05D005920 ORTHO05D007211 4.4e-15 85.1 115 48.7
HanXRQChr05g0151131 Helianthus annuus HOM05D005920 ORTHO05D007211 5.8e-15 84.7 98 49.0
Glyma.13G080100 Glycine max HOM05D005920 ORTHO05D007211 7.6e-15 84.3 100 48.0
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 1.7e-14 83.2 70 61.4
Migut.C01133 Erythranthe guttata HOM05D005920 ORTHO05D007211 2.2e-14 82.8 100 46.0
Lj4A625G9 Lonicera japonica HOM05D005920 ORTHO05D007211 2.2e-14 82.8 89 51.7
SEGI_11742 Sequoiadendron giganteum HOM05D005920 ORTHO05D007211 2.2e-14 82.8 66 57.6
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 2.9e-14 82.4 113 43.4
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 2.9e-14 82.4 113 43.4
SalBow7G4584 Salvia bowleyana HOM05D000555 ORTHO05D007211 4.9e-14 81.6 109 44.0
BcaC03g16447 Brassica carinata HOM05D005920 ORTHO05D007211 8.4e-14 80.9 113 42.5
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 8.4e-14 80.9 113 42.5
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 8.4e-14 80.9 113 42.5
Phvul.008G163200 Phaseolus vulgaris HOM05D005920 ORTHO05D007211 8.4e-14 80.9 76 53.9
Lj1g0027048 Lotus japonicus HOM05D005920 ORTHO05D007211 2.4e-13 79.3 75 50.7
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 9.2e-13 77.4 71 53.5
FAN24G0658 Fragaria x ananassa HOM05D005920 ORTHO05D007211 6.0e-12 74.7 67 53.7
unitig_749.g13933 Utricularia gibba HOM05D005920 ORTHO05D007211 6.0e-12 74.7 71 50.7
PGR042G3885 Punica granatum HOM05D005920 ORTHO05D007211 3.0e-11 72.4 70 55.7
SGA_v2.0_scaffold24G10464 Striga asiatica HOM05D005920 ORTHO05D007211 3.0e-11 72.4 73 49.3
Sabra05G0133900 Salix brachista HOM05D005920 ORTHO05D007211 5.1e-11 71.6 91 41.8
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 8.6e-11 70.9 99 43.4
PGR042G0443 Punica granatum HOM05D005920 ORTHO05D007211 2.5e-10 69.3 95 45.3
FAN20G3053 Fragaria x ananassa HOM05D005920 ORTHO05D007211 3.3e-10 68.9 67 52.2
COL.COLO4_35924 Corchorus olitorius HOM05D005920 ORTHO05D007211 5.6e-10 68.2 87 43.7
Mapoly0102s0012 Marchantia polymorpha HOM05D005920 ORTHO05D007211 9.6e-10 67.4 101 37.6
AagrBONN_evm.TU.Sc2ySwM_344.2076 Anthoceros agrestis HOM05D009220 ORTHO05D012167 1.2e-09 67.0 71 52.1
Nitab4.5_0001803g0120 Nicotiana tabacum HOM05D005920 ORTHO05D007211 3.1e-08 62.4 101 36.6
Zm00001eb389760 Zea mays HOM05D005920 ORTHO05D007211 9.9e-07 57.4 47 55.3
CBR_g88565 Chara braunii HOM05D005920 ORTHO05D007211 1.3e-06 57.0 106 34.0


User provided reference genes

Program Settings