Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 2.6e-68 261.9 133 100.0
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.1e-45 185.3 119 81.5
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 2.9e-35 152.1 120 69.2
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 5.0e-35 151.4 134 63.4
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 6.5e-35 151.0 120 70.8
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 6.5e-35 151.0 120 67.5
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 1.1e-34 150.2 119 68.9
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 1.5e-34 149.8 119 69.7
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 5.5e-34 147.9 119 68.9
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.6e-33 146.4 119 69.7
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.1e-33 146.0 119 68.1
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.7e-33 145.6 120 68.3
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.7e-33 145.6 134 63.4
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.6e-33 145.2 133 62.4
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 3.6e-33 145.2 120 65.0
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 8.0e-33 144.1 133 61.7
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 8.0e-33 144.1 120 68.3
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.0e-32 143.7 119 67.2
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.4e-32 143.3 120 65.8
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.8e-32 142.9 128 64.1
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.3e-32 142.5 120 66.7
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 2.3e-32 142.5 120 65.0
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 2.3e-32 142.5 119 66.4
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 3.0e-32 142.1 119 64.7
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 4.0e-32 141.7 120 67.5
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 5.2e-32 141.4 120 67.5
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 5.2e-32 141.4 119 65.5
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.8e-32 141.0 120 66.7
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.8e-32 141.0 120 66.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 6.8e-32 141.0 119 65.5
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.5e-31 139.8 120 66.7
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 2.0e-31 139.4 119 65.5
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 3.4e-31 138.7 120 64.2
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 3.4e-31 138.7 133 60.9
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 3.4e-31 138.7 123 62.6
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 3.4e-31 138.7 120 65.8
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 4.4e-31 138.3 120 65.8
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 5.7e-31 137.9 120 65.0
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.7e-30 136.3 119 63.9
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.2e-30 136.0 120 67.5
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 2.8e-30 135.6 120 65.0
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 2.8e-30 135.6 118 61.0
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 3.7e-30 135.2 120 64.2
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 3.7e-30 135.2 120 65.0
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 4.8e-30 134.8 122 63.1
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 4.8e-30 134.8 119 58.0
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 4.8e-30 134.8 119 66.4
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 6.3e-30 134.4 120 64.2
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 6.3e-30 134.4 119 65.5
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 8.3e-30 134.0 119 64.7
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 8.3e-30 134.0 119 58.0
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 1.1e-29 133.7 120 63.3
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 2.4e-29 132.5 122 62.3
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 2.4e-29 132.5 120 60.0
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.1e-29 132.1 93 73.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 4.1e-29 131.7 120 58.3
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 4.1e-29 131.7 119 63.9
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 7.0e-29 131.0 120 63.3
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 7.0e-29 131.0 120 61.7
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.2e-28 130.2 122 62.3
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.6e-28 129.8 120 62.5
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.0e-28 129.4 120 64.2
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-28 129.0 123 63.4
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-28 129.0 123 63.4
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 2.7e-28 129.0 120 62.5
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 3.5e-28 128.6 123 62.6
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.5e-28 128.6 123 62.6
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 4.5e-28 128.3 123 63.4
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.5e-28 128.3 123 63.4
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.5e-28 128.3 123 63.4
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.5e-28 128.3 123 63.4
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 5.9e-28 127.9 120 62.5
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 7.7e-28 127.5 121 62.0
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 7.7e-28 127.5 120 62.5
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.0e-27 127.1 106 63.2
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.0e-27 127.1 123 62.6
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.3e-27 126.7 108 65.7
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.3e-27 126.7 120 59.2
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.3e-27 126.7 119 58.0
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.3e-27 126.7 119 58.0
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.9e-27 125.6 123 61.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.9e-27 125.6 108 65.7
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.9e-27 125.6 119 55.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 1.1e-26 123.6 120 60.0
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.5e-26 123.2 120 59.2
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.5e-26 123.2 123 61.0
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.5e-26 123.2 119 52.9
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.5e-26 123.2 121 60.3
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.5e-26 122.5 106 63.2
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 5.5e-26 121.3 120 60.0
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 7.2e-26 120.9 120 58.3
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 9.4e-26 120.6 96 66.7
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.6e-25 119.8 117 58.1
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.1e-25 119.4 120 58.3
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 3.6e-25 118.6 96 67.7
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 4.7e-25 118.2 95 64.2
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 4.7e-25 118.2 95 64.2
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 4.7e-25 118.2 95 64.2
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 4.7e-25 118.2 95 64.2
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 6.1e-25 117.9 120 57.5
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 6.1e-25 117.9 106 60.4
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 6.1e-25 117.9 99 61.6
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 8.0e-25 117.5 119 58.0
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.0e-24 117.1 119 58.0
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 2.3e-24 115.9 96 64.6
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 3.0e-24 115.5 109 59.6
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.0e-24 115.5 92 68.5
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 6.8e-24 114.4 120 57.5
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 8.8e-24 114.0 120 58.3
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.2e-23 113.6 111 58.6
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 1.2e-23 113.6 120 58.3
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 5.7e-23 111.3 119 52.1
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 7.5e-23 110.9 98 62.2
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 9.8e-23 110.5 116 55.2
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.3e-22 110.2 102 60.8
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.4e-21 106.7 96 60.4
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.4e-21 106.7 122 54.1
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.8e-21 106.3 78 69.2
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.8e-21 106.3 117 52.1
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 7.0e-21 104.4 120 52.5
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 1.0e-19 100.5 132 46.2
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.3e-19 100.1 86 61.6
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.3e-19 100.1 78 65.4
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 2.9e-19 99.0 101 57.4
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 6.6e-19 97.8 78 64.1
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 7.2e-18 94.4 119 47.1
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 4.4e-15 85.1 99 52.5
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 7.0e-13 77.8 69 68.1
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.7e-11 73.2 50 72.0
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 3.3e-10 68.9 109 40.4
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 4.7e-09 65.1 77 45.5
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 4.7e-09 65.1 103 39.8
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 1.0e-08 63.9 61 67.2
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 4.0e-08 62.0 90 41.1
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 8.9e-08 60.8 77 42.9
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.5e-07 60.1 85 49.4
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-07 59.3 45 62.2


User provided reference genes

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