Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08747 Nelumbo nucifera HOM05D005374 ORTHO05D006534 4.9e-47 190.7 88 100.0
Nn1g09345 Nelumbo nucifera HOM05D005374 ORTHO05D006534 1.9e-27 125.6 57 98.2
Nn7g37386 Nelumbo nucifera HOM05D005374 ORTHO05D006534 6.9e-25 117.1 57 87.7
Dinv41805 Davidia involucrata HOM05D005374 ORTHO05D006534 5.8e-24 114.0 58 81.0
TAR629G2486 Trochodendron aralioides HOM05D005374 ORTHO05D006534 1.7e-23 112.5 57 80.7
MBI04_g06277_MAGBIO Magnolia biondii HOM05D005374 ORTHO05D006534 2.2e-23 112.1 57 84.2
Aqoxy3G00850 Aquilegia oxysepala HOM05D005374 ORTHO05D006534 2.9e-23 111.7 59 76.3
TAR629G3354 Trochodendron aralioides HOM05D005374 ORTHO05D006534 2.9e-23 111.7 56 82.1
Duzib205G0577 Durio zibethinus HOM05D005374 ORTHO05D006534 4.9e-23 110.9 56 78.6
Prupe.1G353600 Prunus persica HOM05D005374 ORTHO05D006534 6.5e-23 110.5 59 74.6
Gohir.A12G201800 Gossypium hirsutum HOM05D005374 ORTHO05D006534 8.4e-23 110.2 56 78.6
COL.COLO4_16753 Corchorus olitorius HOM05D005374 ORTHO05D006534 1.1e-22 109.8 56 78.6
Thecc.03G319500 Theobroma cacao HOM05D005374 ORTHO05D006534 1.1e-22 109.8 56 78.6
PSO541G3556 Papaver somniferum HOM05D005374 ORTHO05D006534 1.4e-22 109.4 57 78.9
Cfa012294 Carpinus fangiana HOM05D005374 ORTHO05D006534 1.9e-22 109.0 93 55.9
Gohir.D12G204500 Gossypium hirsutum HOM05D005374 ORTHO05D006534 1.9e-22 109.0 56 76.8
Gorai.008G219400 Gossypium raimondii HOM05D005374 ORTHO05D006534 1.9e-22 109.0 56 76.8
CiPaw.11G074900 Carya illinoinensis HOM05D005374 ORTHO05D006534 2.5e-22 108.6 78 62.8
Haze_08435 Corylus avellana HOM05D005374 ORTHO05D006534 2.5e-22 108.6 53 83.0
Dinv37427 Davidia involucrata HOM05D005374 ORTHO05D006534 4.2e-22 107.8 84 60.7
Lalb_Chr16g0380381 Lupinus albus HOM05D005374 ORTHO05D006534 4.2e-22 107.8 55 80.0
Glyma.11G090700 Glycine max HOM05D005374 ORTHO05D006534 9.3e-22 106.7 56 76.8
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 1.6e-21 105.9 56 73.2
arahy.Tifrunner.gnm1.ann1.B0SCIB Arachis hypogaea HOM05D005374 ORTHO05D006534 2.1e-21 105.5 71 66.2
arahy.Tifrunner.gnm1.ann1.BM6K92 Arachis hypogaea HOM05D005374 ORTHO05D006534 2.1e-21 105.5 71 66.2
arahy.Tifrunner.gnm1.ann1.W15AHF Arachis hypogaea HOM05D005374 ORTHO05D006534 2.1e-21 105.5 71 66.2
arahy.Tifrunner.gnm1.ann1.Y4UVSP Arachis hypogaea HOM05D005374 ORTHO05D006534 2.1e-21 105.5 71 66.2
Peaxi162Scf00045g00731 Petunia axillaris HOM05D005374 ORTHO05D006534 2.1e-21 105.5 57 73.7
QL12p004193 Quercus lobata HOM05D005374 ORTHO05D006534 2.1e-21 105.5 53 81.1
Glyma.01G154100 Glycine max HOM05D005374 ORTHO05D006534 2.7e-21 105.1 55 78.2
Nitab4.5_0002244g0130 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.7e-21 105.1 57 73.7
MSTRG.11863 Avicennia marina HOM05D005374 ORTHO05D006534 3.5e-21 104.8 56 75.0
Lj8A3T11 Lonicera japonica HOM05D005374 ORTHO05D006534 3.5e-21 104.8 52 78.8
Cc08_g05810 Coffea canephora HOM05D005374 ORTHO05D006534 6.1e-21 104.0 55 76.4
GSVIVG01036874001 Vitis vinifera HOM05D005374 ORTHO05D006534 6.1e-21 104.0 55 76.4
CAN.G998.19 Capsicum annuum HOM05D005374 ORTHO05D006534 1.0e-20 103.2 57 71.9
CDE02G3607 Ceratophyllum demersum HOM05D005374 ORTHO05D006534 1.0e-20 103.2 59 66.1
Ca_25046_v3 Cicer arietinum L. HOM05D005374 ORTHO05D006534 1.0e-20 103.2 55 74.5
Lj2g0008244 Lotus japonicus HOM05D005374 ORTHO05D006534 1.0e-20 103.2 55 76.4
MELO3C010523.2 Cucumis melo HOM05D005374 ORTHO05D006534 1.3e-20 102.8 52 75.0
CsaV3_4G027900 Cucumis sativus L. HOM05D005374 ORTHO05D006534 1.3e-20 102.8 52 75.0
FvH4_2g37370 Fragaria vesca HOM05D005374 ORTHO05D006534 1.3e-20 102.8 65 61.5
FAN15G3753 Fragaria x ananassa HOM05D005374 ORTHO05D006534 1.3e-20 102.8 65 61.5
FAN27G3004 Fragaria x ananassa HOM05D005374 ORTHO05D006534 1.3e-20 102.8 65 61.5
Sed0016570 Sechium edule HOM05D005374 ORTHO05D006534 1.3e-20 102.8 52 73.1
VMungo1215G0733 Vigna mungo HOM05D005374 ORTHO05D006534 1.3e-20 102.8 55 74.5
Migut.A00528 Erythranthe guttata HOM05D005374 ORTHO05D006534 1.8e-20 102.4 53 73.6
Oeu046780.1 Olea europaea HOM05D005374 ORTHO05D006534 1.8e-20 102.4 53 77.4
MD15G1000900 Malus domestica HOM05D005374 ORTHO05D006534 2.3e-20 102.1 59 66.1
Nitab4.5_0001175g0180 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.3e-20 102.1 57 73.7
Nitab4.5_0006438g0020 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.3e-20 102.1 57 73.7
Phvul.002G121600 Phaseolus vulgaris HOM05D005374 ORTHO05D006534 2.3e-20 102.1 55 72.7
FAN20G2320 Fragaria x ananassa HOM05D005374 ORTHO05D006534 3.0e-20 101.7 65 60.0
Oeu015544.1 Olea europaea HOM05D005374 ORTHO05D006534 3.0e-20 101.7 56 71.4
RcHm_v2.0_Chr6g0304341 Rosa chinensis HOM05D005374 ORTHO05D006534 3.0e-20 101.7 65 60.0
Medtr5g025560 Medicago truncatula HOM05D005374 ORTHO05D006534 3.9e-20 101.3 52 78.8
Eucgr.G01888 Eucalyptus grandis HOM05D005374 ORTHO05D006534 5.1e-20 100.9 56 71.4
Nitab4.5_0000030g0530 Nicotiana tabacum HOM05D005374 ORTHO05D006534 5.1e-20 100.9 57 71.9
Solyc08g075380.3 Solanum lycopersicum HOM05D005374 ORTHO05D006534 5.1e-20 100.9 56 71.4
Sopen08g024010 Solanum pennellii HOM05D005374 ORTHO05D006534 5.1e-20 100.9 56 71.4
PGSC0003DMG400001963 Solanum tuberosum HOM05D005374 ORTHO05D006534 6.7e-20 100.5 56 71.4
SGA_v2.0_scaffold89G27377 Striga asiatica HOM05D005374 ORTHO05D006534 6.7e-20 100.5 56 69.6
ATR0568G167 Amborella trichopoda HOM05D005374 ORTHO05D006534 8.7e-20 100.1 58 69.0
Psat2g145440 Pisum sativum HOM05D005374 ORTHO05D006534 1.5e-19 99.4 52 76.9
Manes.15G191300 Manihot esculenta HOM05D005374 ORTHO05D006534 1.9e-19 99.0 53 73.6
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 1.9e-19 99.0 56 73.2
TPR.G8985 Trifolium pratense HOM05D005374 ORTHO05D006534 1.9e-19 99.0 52 76.9
Lsat_1_v5_gn_6_17221 Lactuca sativa HOM05D005374 ORTHO05D006534 2.5e-19 98.6 53 75.5
Ciclev10012169m.g Citrus clementina HOM05D005374 ORTHO05D006534 3.3e-19 98.2 65 56.9
Duzib084G1112 Durio zibethinus HOM05D005374 ORTHO05D006534 3.3e-19 98.2 87 52.9
arahy.Tifrunner.gnm1.ann1.5XIH37 Arachis hypogaea HOM05D005374 ORTHO05D006534 4.3e-19 97.8 81 55.6
CAN.G884.8 Capsicum annuum HOM05D005374 ORTHO05D006534 4.3e-19 97.8 57 64.9
Cpa.g.sc227.1 Carica papaya HOM05D005374 ORTHO05D006534 4.3e-19 97.8 55 69.1
DCAR_000721 Daucus carota HOM05D005374 ORTHO05D006534 4.3e-19 97.8 56 67.9
PGR031G1488 Punica granatum HOM05D005374 ORTHO05D006534 5.7e-19 97.4 56 66.1
unitig_747.g21918 Utricularia gibba HOM05D005374 ORTHO05D006534 5.7e-19 97.4 56 67.9
Peaxi162Scf00193g00717 Petunia axillaris HOM05D005374 ORTHO05D006534 7.4e-19 97.1 56 67.9
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 1.3e-18 96.3 56 67.9
HanXRQChr17g0558081 Helianthus annuus HOM05D005374 ORTHO05D006534 2.8e-18 95.1 53 71.7
DCAR_004533 Daucus carota HOM05D005374 ORTHO05D006534 4.8e-18 94.4 56 62.5
Atru.chr8.2626 Acer truncatum HOM05D005374 ORTHO05D006534 6.3e-18 94.0 56 66.1
CSS0025693 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 6.3e-18 94.0 56 67.9
CSS0042781 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 6.3e-18 94.0 56 67.9
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 1.1e-17 93.2 52 71.2
Aa31LG9G7650 Aethionema arabicum HOM05D005374 ORTHO05D006534 1.8e-17 92.4 56 64.3
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 2.4e-17 92.0 54 70.4
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 3.1e-17 91.7 55 67.3
THA.LOC104811099 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 5.3e-17 90.9 56 64.3
Eucgr.B01591 Eucalyptus grandis HOM05D005374 ORTHO05D006534 6.9e-17 90.5 49 71.4
Ah.12g058460 Amaranthus hybridus HOM05D005374 ORTHO05D006534 9.0e-17 90.1 51 64.7
Hma1.2p1_1841F.1_g304960 Hydrangea macrophylla HOM05D005374 ORTHO05D006534 2.0e-16 89.0 83 54.2
Sabra01G0180500 Salix brachista HOM05D005374 ORTHO05D006534 2.0e-16 89.0 56 60.7
Potri.004G236200 Populus trichocarpa HOM05D005374 ORTHO05D006534 3.4e-16 88.2 55 61.8
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 3.4e-16 88.2 62 58.1
PGSC0003DMG400018477 Solanum tuberosum HOM05D005374 ORTHO05D006534 4.5e-16 87.8 57 64.9
EL10Ac5g12585 Beta vulgaris HOM05D005374 ORTHO05D006534 1.0e-15 86.7 56 62.5
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 1.0e-15 86.7 55 63.6
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 1.3e-15 86.3 56 62.5
CSS0023834 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 3.8e-15 84.7 78 52.6
ClCG11G016070 Citrullus lanatus HOM05D005374 ORTHO05D006534 3.8e-15 84.7 86 46.5
MD08G1001600 Malus domestica HOM05D005374 ORTHO05D006534 3.8e-15 84.7 60 58.3
Sp2g10310 Schrenkiella parvula HOM05D005374 ORTHO05D006534 3.8e-15 84.7 75 48.0
CARHR176710 Cardamine hirsuta HOM05D005374 ORTHO05D006534 5.0e-15 84.3 52 63.5
Thhalv10000968m.g Eutrema salsugineum HOM05D005374 ORTHO05D006534 5.0e-15 84.3 57 56.1
BcaC06g34439 Brassica carinata HOM05D005374 ORTHO05D006534 6.5e-15 84.0 57 57.9
A06p46630 Brassica napus HOM05D005374 ORTHO05D006534 6.5e-15 84.0 57 57.9
C07p28440 Brassica napus HOM05D005374 ORTHO05D006534 6.5e-15 84.0 57 57.9
BolC7t43384H Brassica oleracea HOM05D005374 ORTHO05D006534 6.5e-15 84.0 57 57.9
BraA06t27536Z Brassica rapa HOM05D005374 ORTHO05D006534 6.5e-15 84.0 57 57.9
Rhsim07G0140100 Rhododendron simsii HOM05D005374 ORTHO05D006534 6.5e-15 84.0 55 61.8
BcaB07g30892 Brassica carinata HOM05D005374 ORTHO05D006534 1.1e-14 83.2 56 57.1
CSS0021507 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 1.1e-14 83.2 56 60.7
AL8G13440 Arabidopsis lyrata HOM05D005374 ORTHO05D006534 1.4e-14 82.8 52 61.5
AT5G45360 Arabidopsis thaliana HOM05D005374 ORTHO05D006534 1.4e-14 82.8 52 61.5
Carub.0008s0275 Capsella rubella HOM05D005374 ORTHO05D006534 1.9e-14 82.4 52 61.5
Sc22g0002240 Simmondsia chinensis HOM05D005374 ORTHO05D006534 2.5e-14 82.0 56 55.4
vmacro14239 Vaccinium macrocarpon HOM05D005374 ORTHO05D006534 2.5e-14 82.0 55 60.0
BcaC06g31556 Brassica carinata HOM05D005374 ORTHO05D006534 3.2e-14 81.6 57 54.4
AUR62030411 Chenopodium quinoa HOM05D005374 ORTHO05D006534 4.6e-13 77.8 56 53.6
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 7.9e-13 77.0 67 53.7
SEGI_09240 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 1.0e-12 76.6 55 54.5
AUR62010482 Chenopodium quinoa HOM05D005374 ORTHO05D006534 1.8e-12 75.9 56 50.0
Hund14303 Selenicereus undatus HOM05D005374 ORTHO05D006534 3.0e-12 75.1 53 52.8
BcaC04g21776 Brassica carinata HOM05D005374 ORTHO05D006534 3.9e-12 74.7 52 55.8
A09p21700 Brassica napus HOM05D005374 ORTHO05D006534 3.9e-12 74.7 52 55.8
C09p27770 Brassica napus HOM05D005374 ORTHO05D006534 3.9e-12 74.7 52 55.8
SMO353G0174 Selaginella moellendorffii HOM05D005374 ORTHO05D006534 1.5e-11 72.8 51 56.9
arahy.Tifrunner.gnm1.ann1.ZNC245 Arachis hypogaea HOM05D005374 ORTHO05D006534 5.7e-11 70.9 86 45.3
MCO16G622 Micromonas commoda HOM05D005374 ORTHO05D006534 9.1e-09 63.5 76 43.4
CBR_g46850 Chara braunii HOM05D005374 ORTHO05D006534 5.9e-08 60.8 44 56.8
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 5.0e-07 57.8 36 63.9


User provided reference genes

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