Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.9e-45 184.9 95 100.0
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.7e-40 169.1 89 96.6
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.2e-40 168.7 95 91.6
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 3.7e-40 167.9 93 90.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 3.7e-40 167.9 92 90.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 4.8e-40 167.5 95 88.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 9.1e-39 163.3 95 87.4
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.5e-38 162.5 95 91.6
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 3.4e-38 161.4 95 86.3
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 3.4e-38 161.4 95 90.5
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 4.5e-38 161.0 95 85.3
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 4.5e-38 161.0 94 91.5
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 4.5e-38 161.0 95 85.3
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 5.9e-38 160.6 93 87.1
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 84.2
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 84.2
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.9e-37 158.3 95 88.4
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 3.8e-37 157.9 96 84.4
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 5.0e-37 157.5 96 85.4
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 85.3
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 5.0e-37 157.5 94 83.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 86.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 6.5e-37 157.1 93 86.0
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 84.2
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.1e-36 156.4 95 82.1
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.1e-36 156.4 95 84.2
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 1.4e-36 156.0 94 86.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.9e-36 155.6 91 86.8
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.9e-36 155.6 92 87.0
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.5e-36 155.2 95 87.4
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.2e-36 154.8 95 82.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 5.5e-36 154.1 89 86.5
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 5.5e-36 154.1 88 92.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 5.5e-36 154.1 85 89.4
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 9.4e-36 153.3 87 87.4
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 9.4e-36 153.3 87 87.4
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 9.4e-36 153.3 95 85.3
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 9.4e-36 153.3 93 81.7
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 9.4e-36 153.3 97 84.5
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.6e-35 152.5 89 85.4
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 2.1e-35 152.1 93 83.9
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.1e-35 152.1 93 83.9
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 83.2
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.7e-35 151.8 89 84.3
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 2.7e-35 151.8 90 86.7
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 3.6e-35 151.4 95 78.9
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 3.6e-35 151.4 93 82.8
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 6.1e-35 150.6 96 82.3
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 7.9e-35 150.2 87 89.7
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 7.9e-35 150.2 85 88.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 7.9e-35 150.2 80 91.2
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.8e-34 149.1 84 86.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 86 83.7
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.3e-34 148.7 95 78.9
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 3.9e-34 147.9 95 78.9
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 5.2e-34 147.5 86 82.6
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.7e-34 147.1 83 85.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 6.7e-34 147.1 86 84.9
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.8e-34 146.7 93 81.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.1e-33 146.4 83 85.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.1e-33 146.4 86 82.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.1e-33 146.4 94 81.9
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.5e-33 146.0 93 80.6
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.0e-33 145.6 119 68.9
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 3.3e-33 144.8 94 80.9
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.4e-33 144.4 110 71.8
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.7e-33 144.1 101 77.2
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.7e-32 142.5 86 83.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.8e-32 141.0 94 74.5
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.8e-32 141.0 94 74.5
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 4.8e-32 141.0 94 77.7
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 6.3e-32 140.6 94 74.5
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 8.2e-32 140.2 97 76.3
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.1e-31 139.8 86 77.9
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.4e-31 139.4 99 74.7
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.8e-31 139.0 81 80.2
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 2.4e-31 138.7 94 73.4
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 3.1e-31 138.3 83 83.1
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.1e-31 138.3 91 76.9
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 4.1e-31 137.9 151 54.3
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.3e-31 137.5 83 80.7
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 5.3e-31 137.5 79 82.3
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 72.3
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 74.5
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.0e-30 135.6 113 65.5
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-30 135.2 90 73.3
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-30 135.2 96 74.0
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.6e-30 135.2 96 74.0
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.6e-30 135.2 96 74.0
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.5e-30 134.8 79 86.1
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 4.5e-30 134.4 94 69.1
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 5.9e-30 134.0 74 86.5
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 5.9e-30 134.0 94 74.5
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 7.7e-30 133.7 83 78.3
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 7.7e-30 133.7 97 73.2
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.2e-29 132.1 97 72.2
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.8e-29 131.3 81 80.2
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 8.5e-29 130.2 84 84.5
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.1e-28 129.8 95 69.5
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-28 129.4 95 69.5
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-28 129.4 95 69.5
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.5e-28 129.4 95 69.5
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.5e-28 129.4 95 69.5
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 3.2e-28 128.3 77 79.2
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 4.2e-28 127.9 95 68.4
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 5.5e-28 127.5 80 85.0
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 7.2e-28 127.1 96 68.8
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.2e-28 127.1 81 79.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 1.6e-27 125.9 75 85.3
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-27 125.6 84 75.0
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.1e-27 125.6 97 69.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.7e-27 125.2 88 67.0
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 4.7e-27 124.4 81 81.5
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.8e-26 122.5 82 74.4
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 3.7e-24 114.8 63 87.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 2.4e-23 112.1 62 85.5
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.1e-23 111.7 66 80.3
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 5.0e-21 104.4 76 72.4
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 6.5e-21 104.0 95 64.2
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.5e-20 102.8 95 63.2
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.6e-19 99.4 91 59.3
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.8e-16 87.8 60 71.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 4.8e-16 87.8 63 71.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 3.1e-15 85.1 47 85.1
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 4.5e-14 81.3 71 53.5
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.3e-13 79.0 62 58.1
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 8.0e-11 70.5 61 60.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.4e-10 69.7 49 65.3
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-07 59.3 48 58.3
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-07 59.3 48 58.3
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.8e-07 59.3 48 58.3


User provided reference genes

Program Settings