Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 3.6e-103 378.3 189 100.0
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 2.1e-87 325.9 167 94.6
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.0e-86 323.6 167 94.6
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 1.0e-86 323.6 167 94.0
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.0e-86 323.6 167 94.0
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 3.0e-86 322.0 167 94.0
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 3.0e-86 322.0 167 93.4
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 5.2e-86 321.2 167 93.4
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 5.2e-86 321.2 167 94.0
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.2e-85 320.1 167 92.8
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.5e-85 319.7 181 88.4
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.6e-85 318.9 167 92.8
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.6e-85 318.9 167 92.8
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 2.6e-85 318.9 167 92.8
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 2.6e-85 318.9 167 90.4
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 3.4e-85 318.5 167 92.2
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 3.4e-85 318.5 167 91.6
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.4e-85 318.5 167 91.6
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 3.4e-85 318.5 167 91.6
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 5.7e-85 317.8 167 91.6
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 5.7e-85 317.8 173 90.2
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 5.7e-85 317.8 167 91.0
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 7.5e-85 317.4 167 91.6
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 7.5e-85 317.4 167 91.0
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 7.5e-85 317.4 178 87.6
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.5e-85 317.4 173 89.0
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 9.8e-85 317.0 178 88.8
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.8e-85 317.0 167 90.4
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 9.8e-85 317.0 178 87.6
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.8e-85 317.0 173 88.4
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 9.8e-85 317.0 167 91.0
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.7e-84 316.2 167 89.8
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.2e-84 315.8 167 91.0
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 2.2e-84 315.8 167 89.2
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 3.7e-84 315.1 167 89.2
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 3.7e-84 315.1 167 90.4
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.7e-84 315.1 167 89.2
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 4.8e-84 314.7 167 89.2
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 4.8e-84 314.7 173 87.3
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 4.8e-84 314.7 167 88.6
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 6.3e-84 314.3 167 89.8
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 6.3e-84 314.3 179 86.6
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 6.3e-84 314.3 167 89.8
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 6.3e-84 314.3 167 89.8
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 6.3e-84 314.3 178 86.0
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 8.3e-84 313.9 167 89.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 8.3e-84 313.9 173 88.4
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 8.3e-84 313.9 167 89.8
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.1e-83 313.5 167 87.4
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 1.1e-83 313.5 167 89.2
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.4e-83 313.2 167 91.0
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 1.4e-83 313.2 167 89.8
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.8e-83 312.8 167 88.6
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 1.8e-83 312.8 173 87.3
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 2.4e-83 312.4 167 88.6
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 3.1e-83 312.0 167 88.0
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 4.1e-83 311.6 173 86.7
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 5.4e-83 311.2 167 88.0
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.4e-83 311.2 180 85.6
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 9.1e-83 310.5 167 89.8
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 9.1e-83 310.5 178 85.4
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 9.1e-83 310.5 167 88.6
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 9.1e-83 310.5 178 83.7
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 9.1e-83 310.5 162 92.0
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 9.1e-83 310.5 167 86.2
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.2e-82 310.1 167 88.0
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 1.6e-82 309.7 165 89.1
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 2.0e-82 309.3 173 85.5
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.0e-82 309.3 165 88.5
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 2.7e-82 308.9 178 84.3
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 2.7e-82 308.9 178 84.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.7e-82 308.9 173 86.1
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 3.5e-82 308.5 178 84.3
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 3.5e-82 308.5 167 87.4
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 3.5e-82 308.5 167 88.6
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 3.5e-82 308.5 162 90.7
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 3.5e-82 308.5 167 86.8
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 4.5e-82 308.1 176 84.7
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 4.5e-82 308.1 167 85.6
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 4.5e-82 308.1 167 88.0
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 7.7e-82 307.4 178 83.7
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 7.7e-82 307.4 167 87.4
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 1.0e-81 307.0 178 84.3
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.3e-81 306.6 178 83.7
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 1.7e-81 306.2 167 87.4
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 1.7e-81 306.2 167 87.4
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.3e-81 305.8 167 86.8
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 2.9e-81 305.4 178 83.1
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 2.9e-81 305.4 178 83.1
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 2.9e-81 305.4 178 83.1
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 2.9e-81 305.4 178 83.1
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 5.0e-81 304.7 167 87.4
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 6.6e-81 304.3 187 81.3
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 8.6e-81 303.9 178 82.6
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.1e-80 303.5 167 86.8
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.1e-80 303.5 167 87.4
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.1e-80 303.5 167 87.4
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 1.1e-80 303.5 183 81.4
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.1e-80 303.5 167 86.8
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.5e-80 303.1 178 82.0
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.5e-80 303.1 167 86.8
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.9e-80 302.8 187 81.3
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.9e-80 302.8 178 80.9
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.9e-80 302.8 167 86.8
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 4.2e-80 301.6 167 86.8
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 4.2e-80 301.6 167 86.8
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 5.5e-80 301.2 167 83.8
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 5.5e-80 301.2 167 83.2
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 7.2e-80 300.8 167 83.8
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 7.2e-80 300.8 178 83.1
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 7.2e-80 300.8 192 79.2
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 9.5e-80 300.4 173 83.2
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.2e-79 300.1 178 82.6
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.1e-79 299.3 167 85.0
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 8.0e-79 297.4 173 82.1
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 2.3e-78 295.8 167 85.0
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 2.3e-78 295.8 167 84.4
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 5.2e-78 294.7 178 81.5
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 6.8e-78 294.3 197 75.6
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.8e-76 288.9 188 77.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.1e-75 287.0 161 87.0
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.8e-75 286.2 171 80.7
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 3.1e-75 285.4 166 81.3
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.6e-74 283.1 191 74.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 2.0e-74 282.7 149 91.9
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 5.9e-74 281.2 221 66.5
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.3e-73 280.0 154 86.4
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 3.8e-73 278.5 167 79.6
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-72 276.6 164 79.3
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-72 276.6 164 79.3
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 3.3e-72 275.4 167 78.4
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.8e-71 272.3 164 78.0
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 4.0e-70 268.5 146 87.7
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.5e-69 264.2 148 83.8
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.7e-68 263.1 152 80.9
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.1e-67 260.4 173 76.9
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.5e-66 255.4 173 74.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 5.0e-65 251.5 176 74.4
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 5.0e-65 251.5 152 76.3
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 8.6e-65 250.8 173 74.0
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 5.8e-61 238.0 159 73.0
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 6.4e-60 234.6 173 70.5
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 1.5e-56 223.4 152 67.1
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 3.3e-56 222.2 124 85.5
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.6e-55 218.8 149 72.5
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.1e-54 215.7 130 78.5
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 3.4e-53 212.2 173 65.9
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.2e-50 203.8 173 62.4
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 7.3e-48 194.5 107 89.7
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 6.2e-47 191.4 171 55.0
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 4.4e-45 185.3 159 55.3
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 4.3e-40 168.7 83 92.8
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 4.0e-38 162.2 78 96.2
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 9.0e-38 161.0 85 95.3
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 2.9e-36 156.0 178 52.2
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 1.4e-35 153.7 119 63.9
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.2e-34 150.6 84 82.1
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.2e-34 150.6 122 64.8
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.0e-21 106.7 68 72.1
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.5e-19 99.8 52 94.2
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 2.5e-19 99.8 122 48.4
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 1.6e-18 97.1 52 92.3
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 3.3e-16 89.4 49 89.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 4.0e-14 82.4 45 88.9
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 1.3e-12 77.4 47 78.7
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.3e-12 77.4 69 63.8
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.9e-12 76.3 68 57.4


User provided reference genes

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