Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08641 Nelumbo nucifera HOM05D000107 ORTHO05D000062 1.4e-93 346.3 175 100.0
Nn1g07035 Nelumbo nucifera HOM05D000107 ORTHO05D000062 3.3e-34 149.1 92 83.7
Ciclev10006474m.g Citrus clementina HOM05D000107 ORTHO05D000062 3.0e-11 72.8 72 43.1
Sopen01g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 3.9e-11 72.4 82 43.9
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 5.1e-11 72.0 82 43.9
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 6.6e-11 71.6 82 43.9
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 6.6e-11 71.6 82 43.9
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 6.6e-11 71.6 82 43.9
Sopen11g021510 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-11 71.6 82 45.1
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 1.5e-10 70.5 73 43.8
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 1.5e-10 70.5 82 43.9
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 2.5e-10 69.7 82 43.9
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 3.3e-10 69.3 82 42.7
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.6e-10 67.8 72 47.2
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-09 67.0 102 33.3
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-09 67.0 102 33.3
HanXRQChr05g0157321 Helianthus annuus HOM05D000107 ORTHO05D000062 2.1e-09 66.6 81 37.0
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-09 66.6 73 35.6
Rhsim11G0143900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-09 66.6 73 41.1
RhsimUnG0245800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-09 66.6 73 42.5
Sopen06g007740 Solanum pennellii HOM05D000107 ORTHO05D000062 2.8e-09 66.2 73 43.8
TAR472G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.8e-09 66.2 72 40.3
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.6e-09 65.9 71 39.4
CSS0033257 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.7e-09 65.5 73 34.2
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.7e-09 65.5 73 35.6
CSS0026197 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.2e-09 65.1 73 35.6
CSS0029536 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.2e-09 65.1 73 34.2
CSS0050164 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.2e-09 65.1 73 35.6
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-09 65.1 73 37.0
CSS0002768 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.1e-09 64.7 128 26.6
CSS0010056 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.1e-09 64.7 73 34.2
CSS0044944 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.1e-09 64.7 73 34.2
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-08 64.3 81 38.3
CSS0004493 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 73 34.2
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-08 64.3 101 32.7
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 63.9 73 37.0
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.8e-08 63.5 82 39.0
ECA164G0001 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.1e-08 62.8 82 37.8
ECA233G5567 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.1e-08 62.8 82 37.8
CSS0022290 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.2e-08 62.0 73 32.9
ECA234G2344 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.2e-08 62.0 82 37.8
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 5.2e-08 62.0 73 42.5
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-08 62.0 73 37.0
RcHm_v2.0_Chr4g0436001 Rosa chinensis HOM05D000107 ORTHO05D000062 5.2e-08 62.0 73 38.4
TAR193G0004 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.2e-08 62.0 173 30.1
Atru.chr3.1416 Acer truncatum HOM05D000107 ORTHO05D000062 6.8e-08 61.6 69 39.1
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.8e-08 61.6 73 35.6
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.8e-08 61.6 82 36.6
ECA227G0003 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.8e-08 61.6 82 36.6
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 6.8e-08 61.6 72 45.8
BraA05t22683Z Brassica rapa HOM05D008309 ORTHO05D000062 8.9e-08 61.2 69 43.5
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.9e-08 61.2 58 43.1
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.9e-08 61.2 72 34.7
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-07 60.8 73 34.2
TAR528G0007 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.2e-07 60.8 68 39.7
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.2e-07 60.8 71 39.4
Psat3g187240 Pisum sativum HOM05D000107 ORTHO05D000062 1.5e-07 60.5 73 43.8
TAR137G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-07 60.5 81 32.1
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-07 60.1 73 34.2
Nitab4.5_0000898g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-07 59.7 120 30.8
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 3.4e-07 59.3 72 37.5
Nn7g37794 Nelumbo nucifera HOM05D000107 ORTHO05D000062 3.4e-07 59.3 73 39.7
AUR62036790 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.4e-07 58.9 81 35.8
ECA247G3242 Erigeron canadensis HOM05D003337 ORTHO05D003808 4.4e-07 58.9 72 38.9
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 4.4e-07 58.9 75 41.3
AUR62027367 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.8e-07 58.5 73 38.4
Ca_02957_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 5.8e-07 58.5 73 41.1
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 5.8e-07 58.5 72 37.5
Rhsim05G0054900 Rhododendron simsii HOM05D004144 ORTHO05D004902 5.8e-07 58.5 83 36.1
TAR034G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.8e-07 58.5 74 37.8
AUR62030189 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.6e-07 58.2 73 38.4
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.6e-07 58.2 64 39.1
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 7.6e-07 58.2 73 35.6
Psat3g029000 Pisum sativum HOM05D000107 ORTHO05D000062 9.9e-07 57.8 72 41.7
Rhsim07G0167400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.9e-07 57.8 73 31.5
TAR230G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.9e-07 57.8 72 33.3
Aqoxy2G01646 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.3e-06 57.4 72 33.3
AUR62040770 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-06 57.4 73 37.0
AUR62040423 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-06 56.6 73 35.6
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-06 56.6 72 37.5
Aqoxy3G01770 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 2.9e-06 56.2 72 34.7
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 2.9e-06 56.2 72 33.3
AUR62035729 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.9e-06 56.2 73 37.0
MBI12_g17739_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 2.9e-06 56.2 83 33.7
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 3.8e-06 55.8 71 38.0
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.8e-06 55.8 74 37.8
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 4.9e-06 55.5 73 37.0
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.9e-06 55.5 72 38.9
Solyc05g042155.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 4.9e-06 55.5 73 35.6
Solyc10g050323.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 4.9e-06 55.5 77 40.3
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 6.4e-06 55.1 180 25.6
MBI19_g47161_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D000062 6.4e-06 55.1 71 36.6
PSO063G0437 Papaver somniferum HOM05D000107 ORTHO05D000062 6.4e-06 55.1 74 36.5
Atru.chr6.157 Acer truncatum HOM05D000107 ORTHO05D000062 8.4e-06 54.7 81 37.0
AUR62004817 Chenopodium quinoa HOM05D007123 ORTHO05D000062 8.4e-06 54.7 85 35.3
PSO210G5576 Papaver somniferum HOM05D011526 ORTHO05D000062 8.4e-06 54.7 81 33.3
RcHm_v2.0_Chr7g0184931 Rosa chinensis HOM05D000107 ORTHO05D000062 8.4e-06 54.7 71 38.0
RcHm_v2.0_Chr7g0201701 Rosa chinensis HOM05D000107 ORTHO05D000062 8.4e-06 54.7 71 38.0


User provided reference genes

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