Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 7.8e-179 632.1 1070 100.0
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 4.1e-39 167.9 386 60.9
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 1.0e-37 163.3 188 59.6
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 5.6e-36 157.5 189 45.5
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 1.4e-34 152.9 188 46.8
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 1.8e-34 152.5 224 43.8
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 3.1e-34 151.8 161 49.7
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 5.2e-34 151.0 162 58.6
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 6.9e-34 150.6 189 48.7
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 9.0e-34 150.2 143 53.1
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 9.0e-34 150.2 143 53.1
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 2.6e-33 148.7 223 42.6
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 1.3e-32 146.4 214 42.5
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 1.2e-30 139.8 375 52.3
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.6e-30 139.4 215 40.0
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 2.1e-30 139.0 163 47.2
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 2.7e-30 138.7 201 42.3
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 2.7e-30 138.7 163 49.1
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 3.5e-30 138.3 162 48.1
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 6.0e-30 137.5 141 49.6
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 7.8e-30 137.1 159 47.2
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 7.8e-30 137.1 189 43.4
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 1.3e-29 136.3 160 47.5
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 3.0e-29 135.2 137 53.3
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.9e-29 134.8 143 49.7
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 8.7e-29 133.7 143 46.9
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 1.1e-28 133.3 147 45.6
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.5e-28 132.9 138 61.6
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 2.5e-28 132.1 155 43.9
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 3.3e-28 131.7 381 50.9
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 3.3e-28 131.7 204 40.7
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 3.3e-28 131.7 190 42.1
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 5.6e-28 131.0 137 56.9
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.3e-27 129.8 190 41.6
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 2.1e-27 129.0 203 38.9
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 2.8e-27 128.6 198 39.9
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 6.2e-27 127.5 141 47.5
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 8.1e-27 127.1 340 52.4
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 8.1e-27 127.1 340 52.4
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 1.8e-26 125.9 142 46.5
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 5.3e-26 124.4 139 43.9
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 5.3e-26 124.4 154 46.8
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 9.0e-26 123.6 144 43.1
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 1.2e-25 123.2 188 43.6
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.5e-25 122.9 211 37.0
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 2.6e-25 122.1 173 40.5
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 2.6e-25 122.1 149 44.3
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 7.6e-25 120.6 164 53.0
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 2.9e-24 118.6 141 44.7
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 4.9e-24 117.9 147 44.9
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 4.9e-24 117.9 149 43.6
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 3.2e-23 115.2 136 53.7
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 4.2e-23 114.8 162 42.6
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 5.4e-23 114.4 193 38.9
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 9.3e-23 113.6 106 55.7
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 2.1e-22 112.5 115 50.4
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 1.0e-21 110.2 107 55.1
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 1.0e-21 110.2 144 41.7
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.3e-21 109.8 163 42.3
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.5e-20 105.5 145 40.7
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 2.5e-20 105.5 199 37.7
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 7.4e-20 104.0 138 43.5
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 1.6e-19 102.8 144 41.7
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 6.4e-16 90.9 96 47.9
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 4.2e-15 88.2 114 43.9
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 4.2e-15 88.2 108 43.5
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.2e-14 86.7 102 46.1
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 2.1e-14 85.9 81 53.1
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 7.9e-14 84.0 153 32.7
Lj5C430G7 Lonicera japonica HOM05D007570 ORTHO05D009365 1.0e-13 83.6 100 49.0
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 1.0e-13 83.6 158 33.5
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.3e-13 83.2 63 60.3
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 6.7e-13 80.9 153 32.7
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 5.6e-12 77.8 251 60.2
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 4.8e-11 74.7 164 31.1
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 1.8e-10 72.8 107 56.1
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 4.5e-09 68.2 163 33.1
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 5.8e-09 67.8 186 31.2
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 7.6e-09 67.4 141 31.9
Haze_00350 Corylus avellana HOM05D007570 ORTHO05D009365 7.6e-09 67.4 87 44.8
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 1.3e-08 66.6 118 31.4
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.3e-08 66.6 100 34.0
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 1.7e-08 66.2 66 51.5
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 2.9e-08 65.5 138 33.3
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 2.9e-08 65.5 138 33.3
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 2.9e-08 65.5 86 43.0
Nitab4.5_0001401g0200 Nicotiana tabacum HOM05D007083 ORTHO05D008801 1.4e-07 63.2 92 31.5
Actinidia35406 Actinidia chinensis HOM05D007390 ORTHO05D009114 3.2e-07 62.0 97 37.1
ATR0829G190 Amborella trichopoda HOM05D007291 ORTHO05D009038 4.2e-07 61.6 104 30.8
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 7.1e-07 60.8 88 36.4
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 9.3e-07 60.5 64 48.4
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 9.3e-07 60.5 88 36.4
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 9.3e-07 60.5 88 36.4
ATR0680G349 Amborella trichopoda HOM05D007570 ORTHO05D009365 1.2e-06 60.1 84 60.7
SEGI_06868 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.2e-06 60.1 92 33.7
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 1.6e-06 59.7 81 35.8
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 1.6e-06 59.7 103 31.1
Lj8P179T40 Lonicera japonica HOM05D007390 ORTHO05D009114 1.6e-06 59.7 93 36.6
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 2.1e-06 59.3 128 26.6
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 2.1e-06 59.3 61 52.5
Rhsim04G0012100 Rhododendron simsii HOM05D007390 ORTHO05D009114 2.1e-06 59.3 97 38.1
Sed0024715 Sechium edule HOM05D007390 ORTHO05D009114 2.1e-06 59.3 96 33.3
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 3.5e-06 58.5 97 34.0
PGR042G0769 Punica granatum HOM05D007083 ORTHO05D008801 3.5e-06 58.5 96 34.4
Dinv40864 Davidia involucrata HOM05D007390 ORTHO05D009114 4.6e-06 58.2 80 41.2
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 6.0e-06 57.8 97 33.0
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 7.9e-06 57.4 63 47.6
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 7.9e-06 57.4 138 27.5
vmacro09644 Vaccinium macrocarpon HOM05D007390 ORTHO05D009114 7.9e-06 57.4 89 34.8


User provided reference genes

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