Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08525 Nelumbo nucifera HOM05D002831 ORTHO05D004341 3.3e-86 321.6 155 100.0
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 3.0e-31 139.0 111 61.3
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.3e-23 113.6 139 48.2
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 2.3e-23 112.8 142 51.4
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 3.9e-23 112.1 104 56.7
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 1.3e-21 107.1 142 47.9
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 1.6e-21 106.7 105 56.2
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 9.0e-20 100.9 117 53.8
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 9.0e-20 100.9 117 53.8
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 5.8e-19 98.2 105 52.4
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 3.8e-18 95.5 106 50.0
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.2e-17 92.4 146 45.2
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.2e-17 92.4 146 45.2
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 4.2e-17 92.0 105 50.5
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 4.2e-17 92.0 106 50.0
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 4.2e-17 92.0 96 53.1
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 5.5e-17 91.7 142 38.0
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 5.5e-17 91.7 142 38.0
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 5.5e-17 91.7 116 50.0
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 7.1e-17 91.3 106 49.1
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.1e-16 89.7 134 44.0
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.7e-16 89.4 117 48.7
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 3.5e-16 89.0 101 51.5
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 3.5e-16 89.0 103 49.5
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.5e-16 89.0 103 49.5
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 3.5e-16 89.0 106 44.3
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 6.1e-16 88.2 99 51.5
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 7.9e-16 87.8 142 39.4
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 1.0e-15 87.4 142 38.7
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 1.3e-15 87.0 106 48.1
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.3e-15 86.3 103 48.5
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 3.0e-15 85.9 118 47.5
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 8.7e-15 84.3 103 47.6
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 8.7e-15 84.3 105 42.9
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 1.9e-14 83.2 96 49.0
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.9e-14 83.2 103 47.6
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 3.3e-14 82.4 118 45.8
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 3.3e-14 82.4 117 47.0
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 4.3e-14 82.0 103 46.6
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 9.7e-14 80.9 131 42.7
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 9.7e-14 80.9 141 40.4
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.3e-13 80.5 103 47.6
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 1.6e-13 80.1 106 48.1
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 2.2e-13 79.7 142 39.4
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 2.2e-13 79.7 104 48.1
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.8e-13 79.3 118 44.1
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 3.7e-13 79.0 103 43.7
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 4.8e-13 78.6 142 40.1
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 4.8e-13 78.6 106 45.3
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 8.2e-13 77.8 140 39.3
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 8.2e-13 77.8 143 38.5
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 1.1e-12 77.4 106 44.3
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 1.4e-12 77.0 143 34.3
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.8e-12 76.6 131 40.5
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.4e-12 76.3 142 40.1
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 2.4e-12 76.3 106 45.3
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.4e-12 76.3 134 40.3
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 2.4e-12 76.3 112 42.9
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 3.1e-12 75.9 143 38.5
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 3.1e-12 75.9 145 37.9
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 4.1e-12 75.5 134 40.3
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 5.3e-12 75.1 107 44.9
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 9.0e-12 74.3 131 41.2
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 3.4e-11 72.4 82 50.0
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.9e-11 71.6 99 46.5
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 5.9e-11 71.6 105 43.8
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 7.7e-11 71.2 145 38.6
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 1.3e-10 70.5 142 38.0
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.3e-10 70.5 142 38.0
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 2.9e-10 69.3 143 39.2
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 2.9e-10 69.3 136 37.5
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.8e-10 68.9 71 59.2
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 5.0e-10 68.6 114 43.0
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 8.5e-10 67.8 142 37.3
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 1.1e-09 67.4 142 36.6
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.4e-09 67.0 142 37.3
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 3.2e-09 65.9 130 40.8
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 4.2e-09 65.5 138 35.5
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 4.2e-09 65.5 135 40.0
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 5.5e-09 65.1 103 42.7
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 5.5e-09 65.1 142 36.6
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 5.5e-09 65.1 72 54.2
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 7.2e-09 64.7 142 36.6
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 7.2e-09 64.7 97 41.2
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 9.4e-09 64.3 165 31.5
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 9.4e-09 64.3 97 44.3
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 1.6e-08 63.5 136 36.8
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 2.1e-08 63.2 142 36.6
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 2.1e-08 63.2 143 33.6
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 2.7e-08 62.8 94 43.6
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 3.6e-08 62.4 107 43.9
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 3.6e-08 62.4 131 36.6
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 3.6e-08 62.4 97 43.3
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 3.6e-08 62.4 142 35.2
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.6e-08 62.4 142 35.2
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.6e-08 62.0 143 36.4
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 4.6e-08 62.0 111 38.7
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 7.9e-08 61.2 124 33.9
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 7.9e-08 61.2 137 36.5
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.0e-07 60.8 110 38.2
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 1.0e-07 60.8 163 31.3
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 1.0e-07 60.8 103 42.7
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 1.4e-07 60.5 142 34.5
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 1.8e-07 60.1 104 40.4
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 2.3e-07 59.7 107 40.2
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.0e-07 59.3 90 48.9
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 5.1e-07 58.5 111 35.1
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 1.1e-06 57.4 114 38.6
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 1.5e-06 57.0 109 36.7
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 1.5e-06 57.0 114 38.6
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.5e-06 57.0 108 38.0
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 1.5e-06 57.0 158 31.0
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 3.3e-06 55.8 71 50.7
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 3.3e-06 55.8 132 37.1
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 4.3e-06 55.5 107 35.5
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 4.3e-06 55.5 112 38.4
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 4.3e-06 55.5 112 38.4
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 5.7e-06 55.1 105 40.0
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 5.7e-06 55.1 110 36.4
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 5.7e-06 55.1 132 37.1
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 7.4e-06 54.7 105 39.0
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 9.7e-06 54.3 137 37.2


User provided reference genes

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