Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 7.5e-303 1043.1 548 100.0
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 4.4e-194 681.8 584 64.7
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.1e-192 677.2 511 69.9
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.4e-192 676.8 591 64.6
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 5.9e-191 671.4 578 63.8
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.2e-188 663.7 584 63.2
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 3.4e-186 655.6 587 62.7
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 1.3e-185 653.7 584 61.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.7e-185 653.3 585 61.7
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 4.9e-185 651.7 614 60.4
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.1e-181 640.6 590 62.2
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.9e-181 639.8 538 65.2
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.9e-181 639.8 538 65.2
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 1.6e-180 636.7 597 60.5
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.0e-179 634.0 574 62.4
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 5.2e-179 631.7 530 66.0
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 6.8e-179 631.3 604 59.6
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 4.4e-178 628.6 578 61.4
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 5.7e-178 628.2 586 58.0
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 5.7e-178 628.2 593 60.7
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 2.2e-177 626.3 593 59.5
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 4.9e-177 625.2 592 59.3
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.4e-176 623.6 588 59.5
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.8e-176 623.2 592 59.1
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.4e-176 622.9 592 59.1
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.4e-176 622.9 575 61.0
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.2e-176 622.5 588 61.1
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 7.0e-176 621.3 562 60.7
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 7.0e-176 621.3 586 58.7
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.7e-174 616.7 534 61.2
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 5.6e-173 611.7 594 59.6
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 1.2e-172 610.5 583 59.2
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 8.0e-172 607.8 635 56.1
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 4.4e-170 602.1 545 60.6
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 4.9e-169 598.6 539 62.0
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 8.3e-169 597.8 586 57.3
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 1.6e-167 593.6 603 56.2
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 6.0e-167 591.7 596 57.0
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 7.8e-167 591.3 585 56.6
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 1.0e-166 590.9 585 56.1
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.3e-166 590.5 593 56.2
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 2.3e-166 589.7 586 57.2
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 8.6e-166 587.8 587 56.2
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 2.5e-165 586.3 590 56.1
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 7.3e-165 584.7 589 56.4
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.6e-164 583.6 501 62.1
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 3.6e-164 582.4 501 62.3
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 8.1e-164 581.3 501 62.3
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 8.1e-164 581.3 496 62.3
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.8e-163 580.1 507 62.1
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 2.0e-162 576.6 500 61.8
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 2.0e-162 576.6 592 55.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 3.4e-162 575.9 496 62.5
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.8e-162 574.3 556 56.3
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 1.3e-161 573.9 515 60.0
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 3.7e-161 572.4 478 63.4
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 6.4e-161 571.6 501 61.1
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 8.3e-161 571.2 593 55.1
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.9e-160 570.1 496 61.1
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.2e-160 567.8 489 60.7
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 1.2e-159 567.4 506 60.3
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 1.7e-158 563.5 597 54.4
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 3.9e-158 562.4 441 67.3
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 5.1e-158 562.0 584 56.0
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.1e-157 560.8 586 55.3
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 7.3e-157 558.1 590 54.6
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 9.5e-157 557.8 502 60.4
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.6e-156 557.0 543 56.2
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.8e-155 553.5 549 56.1
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 2.6e-154 549.7 541 58.2
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 9.9e-154 547.7 585 53.8
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.9e-153 546.2 588 54.1
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 4.9e-153 545.4 627 53.0
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.5e-149 533.9 546 56.2
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 9.6e-149 531.2 463 60.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 2.8e-148 529.6 615 51.7
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 3.1e-147 526.2 655 50.4
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 3.4e-146 522.7 470 60.2
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.3e-145 520.8 506 56.7
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 3.0e-142 509.6 486 56.4
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.3e-141 506.1 609 49.9
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 3.0e-134 483.0 545 52.5
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 5.1e-134 482.3 436 60.1
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 2.1e-132 476.9 517 52.8
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 3.1e-131 473.0 549 51.2
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 6.9e-131 471.9 524 52.7
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 2.7e-127 459.9 490 52.2
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 8.7e-126 454.9 422 58.1
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 8.4e-121 438.3 591 47.0
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.2e-119 434.5 322 72.4
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 6.0e-119 432.2 504 46.6
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.5e-117 427.6 574 48.4
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 2.8e-116 423.3 489 47.4
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 3.0e-102 376.7 529 43.7
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 9.7e-101 371.7 322 61.8
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 3.1e-83 313.5 515 40.4
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.4e-62 245.0 229 62.4
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.9e-57 226.9 210 59.5
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 5.0e-57 226.5 275 51.6
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 6.2e-55 219.5 195 59.5
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 4.4e-53 213.4 282 48.9
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 3.6e-47 193.7 531 30.7
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.2e-45 188.7 203 50.2
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 1.7e-44 184.9 260 45.8
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 4.1e-43 180.3 203 46.3
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 7.8e-42 176.0 118 78.8
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 7.1e-35 152.9 172 51.2
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.9e-32 144.8 113 67.3
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 8.1e-31 139.4 247 42.5
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 3.4e-21 107.5 71 85.9
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 5.4e-19 100.1 63 84.1
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 3.3e-08 64.3 117 34.2
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 7.4e-08 63.2 117 33.3


User provided reference genes

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