Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 3.1e-162 575.1 294 100.0
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 5.4e-90 335.1 267 65.5
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 7.8e-89 331.3 237 72.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 8.6e-88 327.8 268 64.6
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 8.6e-88 327.8 274 65.0
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.1e-85 320.9 273 63.0
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 2.4e-82 309.7 274 62.4
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 9.2e-82 307.8 275 58.9
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 2.1e-81 306.6 275 58.5
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.3e-80 303.9 275 58.2
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.7e-80 303.5 275 58.2
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 2.3e-80 303.1 237 66.7
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 5.1e-80 302.0 237 65.8
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 6.6e-80 301.6 268 61.6
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 1.1e-79 300.8 269 60.2
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 1.9e-79 300.1 238 67.6
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.5e-79 299.7 275 58.2
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.3e-79 299.3 237 63.3
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 5.6e-79 298.5 237 64.6
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 7.3e-79 298.1 269 59.9
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.2e-78 297.4 275 57.5
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.1e-78 296.6 267 61.0
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 2.8e-78 296.2 267 57.7
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.1e-77 294.3 267 59.2
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 5.2e-77 292.0 238 65.1
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 1.2e-76 290.8 267 58.4
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 2.6e-76 289.7 237 63.3
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 1.3e-75 287.3 280 57.9
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 3.8e-75 285.8 269 58.7
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 4.9e-75 285.4 235 66.4
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 6.4e-75 285.0 241 63.5
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 6.4e-75 285.0 267 56.9
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.4e-74 283.9 235 66.0
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.4e-74 283.9 280 55.0
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.9e-74 283.5 231 64.5
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 2.4e-74 283.1 243 61.7
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 2.4e-74 283.1 232 63.8
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 2.4e-74 283.1 267 58.1
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 2.7e-73 279.6 279 56.3
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 7.8e-73 278.1 237 60.3
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.0e-72 277.7 247 61.1
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 3.0e-72 276.2 238 60.5
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 3.9e-72 275.8 227 63.0
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 3.9e-72 275.8 268 54.5
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 5.1e-72 275.4 280 53.6
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.1e-71 274.2 191 70.7
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.1e-71 274.2 268 54.5
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 2.5e-71 273.1 243 61.3
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 4.3e-71 272.3 238 60.5
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 2.1e-70 270.0 238 59.7
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 2.8e-70 269.6 231 61.5
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 3.6e-70 269.2 248 58.5
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 3.6e-70 269.2 268 55.6
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 4.7e-70 268.9 238 59.7
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 6.2e-70 268.5 238 57.6
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 1.4e-69 267.3 288 53.5
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 2.4e-69 266.5 243 59.3
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 3.1e-69 266.2 268 53.4
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 6.9e-69 265.0 250 56.4
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 3.4e-68 262.7 268 51.9
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.4e-68 262.7 271 55.4
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 7.6e-68 261.5 273 53.5
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 7.6e-68 261.5 238 58.4
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 7.6e-68 261.5 204 64.7
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 9.9e-68 261.2 238 58.4
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 1.3e-67 260.8 241 58.5
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 2.2e-67 260.0 283 52.7
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 4.9e-67 258.8 235 58.7
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 4.9e-67 258.8 268 51.9
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 4.9e-67 258.8 271 54.6
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 1.1e-66 257.7 245 58.0
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.4e-66 257.3 238 57.6
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.4e-66 257.3 238 58.0
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.4e-66 257.3 238 57.6
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.4e-66 257.3 263 55.9
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 1.9e-66 256.9 268 52.2
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 1.9e-66 256.9 275 52.7
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 2.4e-66 256.5 220 61.8
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 3.2e-66 256.1 273 51.3
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.2e-66 256.1 268 52.2
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 5.4e-66 255.4 203 64.0
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 7.1e-66 255.0 207 64.3
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.6e-65 253.8 238 57.6
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 2.1e-65 253.4 268 51.1
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 4.6e-65 252.3 211 61.6
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 6.0e-65 251.9 273 50.5
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.0e-64 251.1 244 57.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 1.7e-64 250.4 273 50.2
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 1.7e-64 250.4 273 50.2
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 1.7e-64 250.4 273 50.2
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.3e-64 250.0 259 53.7
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 5.1e-64 248.8 214 62.6
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 1.5e-63 247.3 240 57.1
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.3e-62 244.2 295 50.8
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 3.6e-62 242.7 188 63.8
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 3.1e-61 239.6 274 48.5
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 4.0e-61 239.2 273 49.8
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 5.3e-61 238.8 202 58.9
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 3.9e-56 222.6 215 57.7
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 8.1e-54 214.9 254 46.1
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.1e-53 214.5 227 51.5
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 4.5e-52 209.1 181 56.4
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 4.9e-51 205.7 174 58.0
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 7.1e-50 201.8 182 57.1
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 9.3e-50 201.4 134 73.9
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.0e-48 198.0 181 55.8
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.6e-46 190.7 273 40.3
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 4.8e-46 189.1 212 47.6
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.1e-45 186.4 192 50.5
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 2.5e-42 176.8 126 71.4
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 2.7e-41 173.3 189 46.0
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 6.0e-41 172.2 173 47.4
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.3e-40 170.2 93 86.0
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 9.0e-37 158.3 236 39.4
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-35 154.5 239 41.8
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.9e-31 140.6 196 40.8
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 4.3e-31 139.4 191 38.2
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 3.7e-30 136.3 205 41.5
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 4.1e-29 132.9 127 53.5
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.1e-26 124.8 237 40.1
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 2.7e-25 120.2 88 61.4
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 7.9e-25 118.6 66 83.3
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 1.4e-24 117.9 80 66.2
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.4e-24 117.9 80 65.0
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.1e-23 114.8 80 65.0
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 1.1e-21 108.2 81 64.2
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 4.1e-21 106.3 55 87.3
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 1.7e-14 84.3 95 50.5
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 2.2e-14 84.0 171 28.1
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 7.0e-13 79.0 107 41.1
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.5e-12 76.6 99 45.5
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.5e-12 76.6 99 45.5
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 4.5e-12 76.3 99 44.4
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.9e-12 75.9 99 45.5
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.3e-11 74.7 99 44.4
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 2.2e-11 73.9 54 64.8
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 2.9e-11 73.6 60 61.7
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 9.4e-10 68.6 64 54.7
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.8e-08 64.3 145 26.2
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 8.8e-08 62.0 130 34.6
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 1.5e-07 61.2 200 26.0


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