Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08120 Nelumbo nucifera HOM05D000156 ORTHO05D004238 4.4e-52 207.6 99 100.0
Nn1g08124 Nelumbo nucifera HOM05D000156 ORTHO05D004238 4.4e-52 207.6 99 100.0
Nn1g09546 Nelumbo nucifera HOM05D000156 ORTHO05D004238 2.3e-45 185.3 98 90.8
Nn5g27340 Nelumbo nucifera HOM05D000156 ORTHO05D004238 1.0e-29 133.3 75 90.7
TAR362G0151 Trochodendron aralioides HOM05D000156 ORTHO05D004238 1.3e-24 116.3 98 61.2
Oeu016618.1 Olea europaea HOM05D000156 ORTHO05D004238 7.5e-20 100.5 96 56.2
Dinv33210 Davidia involucrata HOM05D000156 ORTHO05D004238 1.7e-19 99.4 99 55.6
MBI11_g16035_MAGBIO Magnolia biondii HOM05D000156 ORTHO05D004238 2.2e-19 99.0 94 52.1
Dinv07054 Davidia involucrata HOM05D000156 ORTHO05D004238 4.9e-19 97.8 91 54.9
Dinv07055 Davidia involucrata HOM05D000156 ORTHO05D004238 4.9e-19 97.8 91 54.9
Cc03_g14180 Coffea canephora HOM05D000156 ORTHO05D004238 6.4e-19 97.4 90 54.4
TAR633G1731 Trochodendron aralioides HOM05D000156 ORTHO05D004238 8.3e-19 97.1 97 54.6
TAR633G2215 Trochodendron aralioides HOM05D000156 ORTHO05D004238 5.4e-18 94.4 97 53.6
CiPaw.01G170100 Carya illinoinensis HOM05D000156 ORTHO05D004238 1.6e-17 92.8 91 53.8
Lsat_1_v5_gn_1_75020 Lactuca sativa HOM05D000156 ORTHO05D004238 2.7e-17 92.0 87 51.7
Manes.11G128700 Manihot esculenta HOM05D000156 ORTHO05D004238 7.8e-17 90.5 100 52.0
Potri.019G095700 Populus trichocarpa HOM05D000156 ORTHO05D004238 1.0e-16 90.1 95 52.6
Sabra13G0106200 Salix brachista HOM05D000156 ORTHO05D004238 1.7e-16 89.4 100 53.0
Sabra19G0108400 Salix brachista HOM05D000156 ORTHO05D004238 1.7e-16 89.4 96 54.2
Potri.013G127200 Populus trichocarpa HOM05D000156 ORTHO05D004238 2.3e-16 89.0 100 53.0
Atru.chr4.1432 Acer truncatum HOM05D000156 ORTHO05D004238 3.0e-16 88.6 101 51.5
Hma1.2p1_2797F.1_g328710 Hydrangea macrophylla HOM05D000156 ORTHO05D004238 3.0e-16 88.6 91 53.8
ECA248G3323 Erigeron canadensis HOM05D000156 ORTHO05D004238 8.6e-16 87.0 90 48.9
Peaxi162Scf00483g00513 Petunia axillaris HOM05D000156 ORTHO05D004238 2.5e-15 85.5 90 46.7
Actinidia28978 Actinidia chinensis HOM05D000156 ORTHO05D004238 3.3e-15 85.1 99 52.5
Oeu015715.1 Olea europaea HOM05D000156 ORTHO05D004238 4.3e-15 84.7 83 48.2
Peaxi162Scf00180g00010 Petunia axillaris HOM05D000156 ORTHO05D004238 4.3e-15 84.7 88 43.2
Manes.04G035000 Manihot esculenta HOM05D000156 ORTHO05D004238 5.6e-15 84.3 96 53.1
QL10p055952 Quercus lobata HOM05D000156 ORTHO05D004238 5.6e-15 84.3 90 46.7
CAN.G136.7 Capsicum annuum HOM05D000156 ORTHO05D004238 1.2e-14 83.2 94 44.7
Migut.N03063 Erythranthe guttata HOM05D000156 ORTHO05D004238 1.2e-14 83.2 83 49.4
Lj4g0024938 Lotus japonicus HOM05D000156 ORTHO05D004238 2.8e-14 82.0 91 48.4
CSS0012741 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D004238 3.6e-14 81.6 91 48.4
HanXRQChr01g0023281 Helianthus annuus HOM05D000156 ORTHO05D004238 3.6e-14 81.6 86 48.8
Nitab4.5_0007474g0010 Nicotiana tabacum HOM05D000156 ORTHO05D004238 3.6e-14 81.6 94 43.6
Rhsim09G0009500 Rhododendron simsii HOM05D000156 ORTHO05D004238 3.6e-14 81.6 84 46.4
MSTRG.9731 Avicennia marina HOM05D000156 ORTHO05D004238 4.7e-14 81.3 84 50.0
DCAR_027520 Daucus carota HOM05D000156 ORTHO05D004238 6.2e-14 80.9 83 50.6
PGR042G2030 Punica granatum HOM05D000156 ORTHO05D004238 6.2e-14 80.9 89 49.4
Nitab4.5_0007368g0010 Nicotiana tabacum HOM05D000156 ORTHO05D004238 1.4e-13 79.7 94 42.6
Thecc.04G165000 Theobroma cacao HOM05D000156 ORTHO05D004238 1.4e-13 79.7 93 47.3
Lju470A16G19 Lonicera japonica HOM05D000156 ORTHO05D004238 2.3e-13 79.0 109 41.3
Cfa015272 Carpinus fangiana HOM05D000156 ORTHO05D004238 4.0e-13 78.2 101 44.6
COL.COLO4_23454 Corchorus olitorius HOM05D000156 ORTHO05D004238 4.0e-13 78.2 99 47.5
Phvul.003G297100 Phaseolus vulgaris HOM05D000156 ORTHO05D004238 5.2e-13 77.8 93 44.1
MSTRG.24565 Avicennia marina HOM05D000156 ORTHO05D004238 6.8e-13 77.4 83 45.8
PSO573G0008 Papaver somniferum HOM05D000156 ORTHO05D004238 6.8e-13 77.4 105 41.0
Duzib212G0624 Durio zibethinus HOM05D000156 ORTHO05D004238 8.9e-13 77.0 98 46.9
VMungo0251G3401 Vigna mungo HOM05D000156 ORTHO05D004238 8.9e-13 77.0 94 45.7
Haze_01355 Corylus avellana HOM05D000156 ORTHO05D004238 1.2e-12 76.6 103 44.7
Glyma.07G207300 Glycine max HOM05D000156 ORTHO05D004238 1.5e-12 76.3 96 43.8
FvH4_4g10360 Fragaria vesca HOM05D000156 ORTHO05D004238 2.6e-12 75.5 90 47.8
FAN12G2486 Fragaria x ananassa HOM05D000156 ORTHO05D004238 2.6e-12 75.5 90 47.8
FAN12G3396 Fragaria x ananassa HOM05D000156 ORTHO05D004238 2.6e-12 75.5 90 47.8
FAN22G1607 Fragaria x ananassa HOM05D000156 ORTHO05D004238 2.6e-12 75.5 90 47.8
TWI38G2046 Tripterygium wilfordii HOM05D000156 ORTHO05D004238 2.6e-12 75.5 86 53.5
Lalb_Chr05g0218871 Lupinus albus HOM05D000156 ORTHO05D004238 3.4e-12 75.1 94 42.6
Solyc06g053450.4 Solanum lycopersicum HOM05D000156 ORTHO05D004238 3.4e-12 75.1 86 44.2
Sopen06g018530 Solanum pennellii HOM05D000156 ORTHO05D004238 3.4e-12 75.1 86 44.2
PGSC0003DMG401016333 Solanum tuberosum HOM05D000156 ORTHO05D004238 3.4e-12 75.1 83 44.6
vmacro00693 Vaccinium macrocarpon HOM05D000156 ORTHO05D004238 3.4e-12 75.1 87 41.4
Peaxi162Scf00075g01322 Petunia axillaris HOM05D000156 ORTHO05D004238 5.8e-12 74.3 89 42.7
Psat7g119920 Pisum sativum HOM05D000156 ORTHO05D004238 7.5e-12 73.9 96 41.7
Duzib151G1125 Durio zibethinus HOM05D000156 ORTHO05D004238 9.9e-12 73.6 91 48.4
Lalb_Chr09g0328081 Lupinus albus HOM05D000156 ORTHO05D004238 9.9e-12 73.6 90 41.1
EL10Ac3g06097 Beta vulgaris HOM05D000156 ORTHO05D004238 1.7e-11 72.8 102 45.1
Medtr4g087420 Medicago truncatula HOM05D000156 ORTHO05D004238 2.2e-11 72.4 93 40.9
TPR.G23525 Trifolium pratense HOM05D000156 ORTHO05D004238 2.9e-11 72.0 92 37.0
FAN17G1103 Fragaria x ananassa HOM05D000156 ORTHO05D004238 4.9e-11 71.2 90 45.6
Prupe.1G207600 Prunus persica HOM05D000156 ORTHO05D004238 6.4e-11 70.9 90 47.8
AUR62002397 Chenopodium quinoa HOM05D000156 ORTHO05D004238 1.1e-10 70.1 102 45.1
AUR62023786 Chenopodium quinoa HOM05D000156 ORTHO05D004238 1.1e-10 70.1 102 45.1
CiPaw.02G100100 Carya illinoinensis HOM05D000156 ORTHO05D004238 1.4e-10 69.7 110 41.8
FAN07G2192 Fragaria x ananassa HOM05D000156 ORTHO05D004238 1.4e-10 69.7 90 44.4
PGSC0003DMG400016053 Solanum tuberosum HOM05D000156 ORTHO05D004238 1.4e-10 69.7 85 40.0
CAN.G759.6 Capsicum annuum HOM05D000156 ORTHO05D004238 1.9e-10 69.3 92 37.0
Eucgr.L00007 Eucalyptus grandis HOM05D000156 ORTHO05D004238 1.9e-10 69.3 90 44.4
PSO017G4103 Papaver somniferum HOM05D000156 ORTHO05D004238 1.9e-10 69.3 106 39.6
Glyma.02G138000 Glycine max HOM05D000156 ORTHO05D004238 2.4e-10 68.9 98 39.8
Sopen08g005190 Solanum pennellii HOM05D000156 ORTHO05D004238 2.4e-10 68.9 92 37.0
SalBow3G3788 Salvia bowleyana HOM05D000156 ORTHO05D004238 3.2e-10 68.6 81 44.4
Gohir.A10G144200 Gossypium hirsutum HOM05D000156 ORTHO05D004238 4.1e-10 68.2 84 46.4
Ca_18635_v3 Cicer arietinum L. HOM05D000156 ORTHO05D004238 5.4e-10 67.8 97 41.2
Ca_29980_v3 Cicer arietinum L. HOM05D000156 ORTHO05D004238 5.4e-10 67.8 97 41.2
Hund03206 Selenicereus undatus HOM05D000156 ORTHO05D004238 5.4e-10 67.8 101 37.6
Aqoxy5G04069 Aquilegia oxysepala HOM05D000156 ORTHO05D004238 7.1e-10 67.4 92 45.7
Solyc08g014280.3 Solanum lycopersicum HOM05D000156 ORTHO05D004238 7.1e-10 67.4 85 38.8
TWI15G1140 Tripterygium wilfordii HOM05D000156 ORTHO05D004238 7.1e-10 67.4 88 50.0
Ah.13g073440 Amaranthus hybridus HOM05D000156 ORTHO05D004238 9.2e-10 67.0 101 42.6
Eucgr.H00308 Eucalyptus grandis HOM05D000156 ORTHO05D004238 9.2e-10 67.0 83 43.4
Gohir.D10G122800 Gossypium hirsutum HOM05D000156 ORTHO05D004238 1.2e-09 66.6 84 46.4
Gorai.011G135300 Gossypium raimondii HOM05D000156 ORTHO05D004238 1.2e-09 66.6 84 46.4
Lalb_Chr16g0384401 Lupinus albus HOM05D000156 ORTHO05D004238 1.2e-09 66.6 96 41.7
MD04G1049400 Malus domestica HOM05D000156 ORTHO05D004238 1.6e-09 66.2 109 42.2
Sc13g0006920 Simmondsia chinensis HOM05D000156 ORTHO05D004238 2.1e-09 65.9 92 43.5
Rhsim02G0084500 Rhododendron simsii HOM05D000156 ORTHO05D004238 3.5e-09 65.1 109 42.2
arahy.Tifrunner.gnm1.ann1.J580FK Arachis hypogaea HOM05D000156 ORTHO05D004238 4.6e-09 64.7 95 40.0
arahy.Tifrunner.gnm1.ann1.ZE7QP6 Arachis hypogaea HOM05D000156 ORTHO05D004238 4.6e-09 64.7 95 40.0
Cpa.g.sc9.371 Carica papaya HOM05D000156 ORTHO05D004238 1.0e-08 63.5 83 48.2
GSVIVG01038148001 Vitis vinifera HOM05D000156 ORTHO05D004238 1.0e-08 63.5 66 50.0
Ah.07g202840 Amaranthus hybridus HOM05D000156 ORTHO05D004238 1.3e-08 63.2 96 39.6
RcHm_v2.0_Chr4g0405911 Rosa chinensis HOM05D000156 ORTHO05D004238 1.3e-08 63.2 90 45.6
CANSAT56G2250 Cannabis sativa HOM05D000156 ORTHO05D004238 1.7e-08 62.8 103 39.8
Gohir.D02G009900 Gossypium hirsutum HOM05D000156 ORTHO05D004238 1.7e-08 62.8 102 40.2
Gorai.005G012200 Gossypium raimondii HOM05D000156 ORTHO05D004238 1.7e-08 62.8 102 40.2
MD13G1257200 Malus domestica HOM05D000156 ORTHO05D004238 2.3e-08 62.4 89 42.7
Hund12379 Selenicereus undatus HOM05D000156 ORTHO05D004238 3.0e-08 62.0 103 40.8
Lj6A211G16 Lonicera japonica HOM05D000156 ORTHO05D004238 3.9e-08 61.6 86 41.9
Oeu048443.1 Olea europaea HOM05D000156 ORTHO05D004238 3.9e-08 61.6 56 53.6
Gohir.A02G009700 Gossypium hirsutum HOM05D000156 ORTHO05D004238 5.1e-08 61.2 100 37.0
Actinidia27116 Actinidia chinensis HOM05D000156 ORTHO05D004238 8.6e-08 60.5 84 39.3
Sed0019824 Sechium edule HOM05D000156 ORTHO05D004238 8.6e-08 60.5 87 40.2
Lj6A221G17 Lonicera japonica HOM05D000156 ORTHO05D004238 1.1e-07 60.1 96 39.6
HanXRQChr11g0343121 Helianthus annuus HOM05D000156 ORTHO05D004238 3.3e-07 58.5 59 50.8
ClCG06G001120 Citrullus lanatus HOM05D000156 ORTHO05D004238 7.3e-07 57.4 101 35.6
Gohir.D09G212100 Gossypium hirsutum HOM05D000156 ORTHO05D004238 9.5e-07 57.0 92 40.2
Gorai.006G231900 Gossypium raimondii HOM05D000156 ORTHO05D004238 9.5e-07 57.0 92 40.2
Gohir.A09G213604 Gossypium hirsutum HOM05D000156 ORTHO05D004238 1.6e-06 56.2 92 40.2
SGA_v2.0_scaffold283G46954 Striga asiatica HOM05D000156 ORTHO05D004238 1.6e-06 56.2 91 33.0
ECA246G1958 Erigeron canadensis HOM05D000156 ORTHO05D004238 2.1e-06 55.8 95 37.9
Thhalv10001347m.g Eutrema salsugineum HOM05D000156 ORTHO05D004238 6.2e-06 54.3 99 41.4
Nitab4.5_0000013g0510 Nicotiana tabacum HOM05D000156 ORTHO05D004238 8.1e-06 53.9 69 39.1


User provided reference genes

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