Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.8e-34 148.7 74 100.0
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 2.1e-22 108.6 66 83.3
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 4.6e-22 107.5 67 80.6
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 4.6e-14 80.9 66 56.1
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 1.0e-13 79.7 66 56.1
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 8.7e-13 76.6 66 57.6
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.5e-12 75.9 66 57.6
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.3e-11 72.8 66 51.5
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 2.1e-11 72.0 67 56.7
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 1.1e-10 69.7 64 56.2
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 1.4e-10 69.3 67 52.2
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 5.3e-10 67.4 65 50.8
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 5.3e-10 67.4 65 50.8
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 1.2e-09 66.2 68 50.0
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.5e-09 65.9 67 44.8
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.0e-09 65.5 66 54.5
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 2.6e-09 65.1 67 44.8
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 4.5e-09 64.3 68 50.0
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 5.8e-09 63.9 64 53.1
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 5.8e-09 63.9 64 51.6
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 2.9e-08 61.6 65 41.5
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.9e-08 61.6 63 44.4
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 3.8e-08 61.2 66 47.0
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 8.4e-08 60.1 66 43.9
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 8.4e-08 60.1 66 45.5
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.9e-07 58.9 66 43.9
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.9e-07 58.9 59 44.1
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.5e-07 58.5 63 46.0
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 2.5e-07 58.5 67 40.3
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 3.2e-07 58.2 66 42.4
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 5.5e-07 57.4 65 44.6
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 1.2e-06 56.2 66 43.9
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 2.1e-06 55.5 67 43.3
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 2.7e-06 55.1 64 45.3


User provided reference genes

Program Settings