Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 2.6e-61 238.4 113 100.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 4.8e-39 164.5 111 72.1
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.5e-35 152.9 116 65.5
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 8.0e-34 147.1 108 63.9
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 2.0e-32 142.5 109 59.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 4.4e-32 141.4 114 63.2
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.8e-31 138.7 111 59.5
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 4.9e-31 137.9 113 58.4
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 6.3e-31 137.5 114 62.3
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.1e-30 136.7 105 61.0
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 1.4e-30 136.3 110 59.1
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.4e-30 136.3 105 61.0
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.8e-30 136.0 111 59.5
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.4e-30 135.6 112 57.1
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 3.1e-30 135.2 113 58.4
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 5.4e-30 134.4 105 60.0
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 7.0e-30 134.0 106 60.4
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 9.2e-30 133.7 108 58.3
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-29 133.3 111 58.6
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.6e-29 132.9 113 56.6
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.0e-29 132.5 108 58.3
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 7.8e-29 130.6 106 60.4
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.0e-28 130.2 113 55.8
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.0e-28 130.2 114 56.1
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 1.3e-28 129.8 108 59.3
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.3e-28 129.8 108 55.6
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 6.6e-28 127.5 105 60.0
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.6e-28 127.1 105 61.0
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 8.6e-28 127.1 105 61.0
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.5e-27 126.3 105 60.0
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.9e-27 125.9 115 56.5
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.9e-27 125.9 108 56.5
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.9e-27 125.9 108 56.5
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.9e-27 125.9 110 57.3
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.9e-27 125.9 84 71.4
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.5e-27 125.6 108 56.5
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.3e-27 125.2 108 55.6
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.3e-27 125.2 108 55.6
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 3.3e-27 125.2 105 55.2
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.6e-27 124.4 108 54.6
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 1.6e-26 122.9 106 56.6
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.1e-26 122.5 100 57.0
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 2.8e-26 122.1 66 77.3
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 3.6e-26 121.7 113 50.4
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 4.7e-26 121.3 109 56.0
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 4.7e-26 121.3 70 71.4
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 4.7e-26 121.3 111 55.9
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 6.1e-26 120.9 107 54.2
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.0e-25 120.2 60 80.0
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.4e-25 119.8 105 55.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.4e-25 119.8 101 60.4
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.8e-25 119.4 98 60.2
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.8e-25 119.4 108 53.7
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.8e-25 119.4 105 53.3
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 2.3e-25 119.0 105 58.1
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 2.3e-25 119.0 111 53.2
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 5.2e-25 117.9 55 85.5
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 8.9e-25 117.1 119 50.4
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.2e-24 116.7 110 55.5
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.2e-24 116.7 105 55.2
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.5e-24 116.3 111 50.5
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.0e-24 115.9 57 84.2
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.0e-24 115.9 110 51.8
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 3.4e-24 115.2 112 52.7
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.4e-24 114.8 105 51.4
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 7.5e-24 114.0 76 65.8
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 7.5e-24 114.0 110 49.1
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 9.8e-24 113.6 87 54.0
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.3e-23 113.2 102 52.0
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.3e-23 113.2 112 51.8
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.9e-23 112.1 53 88.7
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 2.9e-23 112.1 108 47.2
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.7e-23 111.7 105 52.4
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 4.9e-23 111.3 63 71.4
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 6.4e-23 110.9 52 86.5
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 6.4e-23 110.9 86 55.8
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 8.3e-23 110.5 97 53.6
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 8.3e-23 110.5 97 53.6
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 8.3e-23 110.5 97 53.6
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 8.3e-23 110.5 111 47.7
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 1.4e-22 109.8 52 82.7
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.8e-22 109.4 55 80.0
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.8e-22 109.4 51 88.2
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 3.2e-22 108.6 106 49.1
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 3.2e-22 108.6 53 83.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 4.1e-22 108.2 52 82.7
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 5.4e-22 107.8 55 83.6
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 5.4e-22 107.8 50 88.0
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.2e-21 106.7 111 49.5
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.2e-21 106.7 105 50.5
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.2e-21 106.7 51 82.4
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.6e-21 106.3 105 49.5
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 1.6e-21 106.3 110 50.9
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.0e-21 105.9 104 51.9
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.0e-21 105.9 105 51.4
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 4.6e-21 104.8 52 76.9
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 5.9e-21 104.4 51 84.3
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 7.8e-21 104.0 47 89.4
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 3.9e-20 101.7 107 48.6
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 5.0e-20 101.3 50 78.0
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 5.0e-20 101.3 50 82.0
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 6.6e-20 100.9 112 44.6
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 8.6e-20 100.5 73 63.0
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.9e-19 99.4 101 46.5
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 4.3e-19 98.2 103 46.6
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 7.3e-19 97.4 103 48.5
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.2e-18 96.7 111 46.8
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 2.1e-18 95.9 114 43.0
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.6e-18 95.1 64 67.2
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.0e-16 89.4 49 69.4
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 1.4e-14 83.2 55 58.2


User provided reference genes

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