Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 8.0e-194 680.2 345 100.0
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 3.9e-31 139.8 338 35.2
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 1.9e-30 137.5 338 35.2
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 2.4e-28 130.6 161 47.8
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 6.9e-28 129.0 172 46.5
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 5.8e-27 125.9 352 33.8
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 2.9e-26 123.6 168 47.0
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 4.2e-25 119.8 168 43.5
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.1e-24 117.5 168 44.0
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.1e-24 117.5 168 44.0
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 4.6e-24 116.3 151 52.3
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 6.0e-24 115.9 162 43.8
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.5e-22 110.5 168 42.3
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 7.4e-22 109.0 347 32.6
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.3e-21 108.2 174 42.0
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.6e-21 107.8 165 42.4
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.6e-21 107.8 142 45.8
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 2.1e-21 107.5 146 43.8
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.8e-21 107.1 158 43.0
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 3.7e-21 106.7 139 48.2
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 3.7e-21 106.7 154 43.5
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.8e-21 106.3 168 41.1
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.2e-21 105.9 152 42.1
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 3.1e-20 103.6 141 46.8
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.2e-19 101.7 166 42.8
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 2.0e-19 100.9 151 42.4
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 2.6e-19 100.5 145 44.8
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.7e-18 97.8 173 38.7
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 2.2e-18 97.4 155 43.9
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.9e-18 97.1 155 43.2
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 6.5e-18 95.9 161 42.2
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 8.4e-18 95.5 176 38.6
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.1e-17 95.1 117 49.6
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.1e-17 95.1 154 41.6
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.4e-17 94.7 167 38.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 3.2e-17 93.6 158 43.0
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 5.5e-17 92.8 159 40.9
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 7.1e-17 92.4 159 40.9
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 7.1e-17 92.4 169 41.4
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 7.1e-17 92.4 158 41.1
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 1.6e-16 91.3 173 38.2
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.1e-16 90.9 169 39.1
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 3.0e-15 87.0 104 48.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 8.7e-15 85.5 173 37.0
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.5e-14 84.7 156 39.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.5e-14 84.7 174 39.7
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.9e-14 84.3 172 36.0
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.6e-13 81.3 171 35.7
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 1.6e-13 81.3 154 36.4
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 2.2e-13 80.9 124 44.4
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 2.2e-13 80.9 122 44.3
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 3.7e-13 80.1 174 36.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 3.7e-13 80.1 154 37.0
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 6.3e-13 79.3 175 34.9
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 6.3e-13 79.3 155 37.4
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 2.4e-12 77.4 168 36.9
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.4e-12 77.4 115 44.3
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 5.9e-11 72.8 102 47.1
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 1.3e-10 71.6 151 36.4
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 5.0e-10 69.7 78 52.6
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 5.0e-10 69.7 155 35.5
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 5.5e-09 66.2 166 33.7
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 3.6e-08 63.5 168 33.9
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 2.3e-07 60.8 167 32.9
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 3.0e-07 60.5 96 45.8
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 3.9e-07 60.1 72 48.6
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 5.7e-06 56.2 81 45.7
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 5.7e-06 56.2 184 28.3


User provided reference genes

Program Settings