Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.5e-77 293.1 147 100.0
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 5.3e-54 214.9 147 74.1
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 2.7e-50 202.6 145 70.3
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 2.6e-45 186.0 142 66.2
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 2.2e-44 183.0 143 62.9
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 8.4e-44 181.0 142 62.7
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.1e-43 180.6 146 63.7
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.2e-43 179.1 147 59.9
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.6e-42 175.3 146 59.6
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 7.9e-42 174.5 147 59.9
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 6.7e-41 171.4 143 60.8
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 8.7e-41 171.0 143 59.4
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.1e-40 170.6 145 59.3
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 3.3e-40 169.1 145 56.6
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.3e-40 168.7 146 57.5
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 5.6e-40 168.3 144 59.0
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 5.6e-40 168.3 144 59.7
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 7.4e-40 167.9 98 81.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 3.7e-39 165.6 168 54.2
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 1.1e-38 164.1 142 57.7
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.1e-38 164.1 140 57.9
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.4e-38 163.7 138 65.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.4e-38 163.7 144 59.7
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.8e-38 163.3 98 81.6
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 2.4e-38 162.9 142 57.0
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 3.1e-38 162.5 145 53.8
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 4.0e-38 162.2 146 56.2
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 4.0e-38 162.2 141 57.4
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 4.0e-38 162.2 144 58.3
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 9.0e-38 161.0 144 59.7
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 9.0e-38 161.0 181 47.0
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.0e-37 159.8 146 52.1
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 2.6e-37 159.5 145 56.6
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 4.5e-37 158.7 142 55.6
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.0e-36 157.5 147 55.8
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.0e-36 157.5 164 56.7
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 4.9e-36 155.2 140 57.9
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.1e-35 154.1 137 56.9
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 1.1e-35 154.1 134 63.4
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 1.4e-35 153.7 161 51.6
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.5e-35 152.9 142 57.0
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 4.2e-35 152.1 146 50.7
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 5.5e-35 151.8 99 71.7
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 7.1e-35 151.4 100 75.0
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 7.1e-35 151.4 126 63.5
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 7.1e-35 151.4 142 54.2
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.3e-35 151.0 165 52.7
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.6e-34 150.2 146 52.1
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 1.6e-34 150.2 165 53.3
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 3.5e-34 149.1 167 52.1
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 3.5e-34 149.1 122 63.1
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 3.5e-34 149.1 146 50.7
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 6.0e-34 148.3 143 50.3
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.3e-33 147.1 101 72.3
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 3.0e-33 146.0 127 57.5
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 3.0e-33 146.0 150 54.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 5.1e-33 145.2 129 59.7
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.7e-33 144.4 165 50.9
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.5e-32 143.7 125 56.0
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.9e-32 143.3 142 57.7
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 4.3e-32 142.1 92 76.1
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 5.7e-32 141.7 126 57.1
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 5.7e-32 141.7 95 71.6
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.6e-31 140.2 98 66.3
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 2.1e-31 139.8 133 55.6
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 2.8e-31 139.4 125 56.0
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 2.8e-31 139.4 105 63.8
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 8.2e-31 137.9 125 55.2
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.8e-30 136.7 126 56.3
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.4e-30 136.3 125 54.4
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.4e-30 136.3 125 54.4
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.4e-30 136.3 174 44.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 3.1e-30 136.0 125 54.4
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.1e-30 136.0 125 54.4
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 3.1e-30 136.0 91 69.2
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 4.1e-30 135.6 95 66.3
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 5.3e-30 135.2 123 55.3
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.5e-29 133.7 145 48.3
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-29 132.1 98 61.2
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 7.6e-29 131.3 104 60.6
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.0e-28 131.0 146 51.4
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.0e-28 131.0 153 51.0
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 5.0e-28 128.6 153 50.3
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 8.4e-28 127.9 145 49.7
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.4e-27 127.1 153 49.7
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 3.2e-27 125.9 98 61.2
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 3.2e-27 125.9 145 46.2
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 4.2e-27 125.6 143 49.7
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 7.2e-27 124.8 98 61.2
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 7.2e-27 124.8 134 49.3
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 7.2e-27 124.8 147 47.6
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 1.0e-25 120.9 147 44.2
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.8e-25 120.2 122 54.9
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 7.4e-24 114.8 102 56.9
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.4e-24 114.8 158 42.4
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.4e-24 114.8 158 42.4
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.3e-20 104.0 83 63.9
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 9.4e-19 97.8 143 38.5
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 3.0e-17 92.8 139 37.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 3.1e-14 82.8 124 36.3
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 1.1e-11 74.3 64 53.1
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.6e-10 70.5 136 37.5
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 4.7e-10 68.9 64 46.9


User provided reference genes

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