Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07897 Nelumbo nucifera HOM05D005014 ORTHO05D003704 5.6e-40 167.2 84 100.0
Nn6g32949 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.3e-33 145.2 78 96.2
TAR629G0656 Trochodendron aralioides HOM05D005014 ORTHO05D003704 3.2e-27 124.8 79 84.8
unitig_548.g34883 Utricularia gibba HOM05D000920 ORTHO05D003704 7.8e-26 120.2 89 74.2
unitig_550.g34863 Utricularia gibba HOM05D000920 ORTHO05D004854 3.0e-25 118.2 87 73.6
unitig_579.g34797 Utricularia gibba HOM05D000920 ORTHO05D003704 3.0e-25 118.2 87 73.6
unitig_676.g29553 Utricularia gibba HOM05D000920 ORTHO05D004854 3.0e-25 118.2 87 73.6
unitig_99.g29794 Utricularia gibba HOM05D000920 ORTHO05D004854 3.0e-25 118.2 87 73.6
Nn040s41779 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn046s41877 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn059s42015 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn062s42182 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn110s43368 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn127s43695 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn130s43802 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn201s44931 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn230s45518 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn282s46104 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn2g14764 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn334s46395 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn3g20573 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn448s46698 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn5g29029 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn5g31151 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn5g31326 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-22 109.4 54 100.0
Nn058s41944 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.8e-22 107.1 53 100.0
Nn1g00028 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.8e-22 107.1 53 100.0
Nn5g27321 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-21 106.3 54 98.1
Nn1g03179 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.0e-21 105.5 53 98.1
Nn372s46531 Nelumbo nucifera HOM05D005014 ORTHO05D003704 4.4e-21 104.4 64 84.4
Nn413s46580 Nelumbo nucifera HOM05D005014 ORTHO05D003704 4.4e-21 104.4 64 84.4
Nn6g33199 Nelumbo nucifera HOM05D005014 ORTHO05D003704 4.4e-21 104.4 64 84.4
Nn085s42712 Nelumbo nucifera HOM05D005014 ORTHO05D003704 9.9e-21 103.2 54 98.1
Nn376s46544 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.4e-20 100.5 49 100.0
Nn038s41686 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn069s42332 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn076s42503 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn077s42573 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn110s43322 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn126s43656 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn159s44357 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn159s44380 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn194s44813 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn195s44839 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn203s45005 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn204s45054 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn213s45231 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn217s45257 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn221s45334 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn230s45541 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn236s45579 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn237s45606 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn240s45667 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn242s45700 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn244s45736 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn246s45790 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn250s45845 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn251s45862 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn252s45892 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn260s45914 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn268s45994 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn272s46026 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn275s46071 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn284s46114 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn288s46167 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn289s46173 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn294s46207 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn299s46211 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn2g16032 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn306s46248 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn307s46265 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn310s46285 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn315s46314 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn327s46356 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn338s46397 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn341s46426 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn344s46454 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn352s46489 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn356s46506 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g16124 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g20260 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g20551 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g20610 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g20616 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn3g20812 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn408s46579 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn415s46594 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn425s46612 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn441s46684 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn450s46700 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn4g25100 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn4g25908 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn5g31242 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn5g31442 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn5g31460 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn6g32482 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn6g33218 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn7g38477 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
Nn8g41316 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.7e-18 95.1 46 100.0
BNapus_Darmor_BZH_scaffold_107p00180 Brassica napus HOM05D000920 ORTHO05D003704 1.3e-17 92.8 83 66.3
BNapus_Darmor_BZH_scaffold_107p00210 Brassica napus HOM05D000920 ORTHO05D004854 6.6e-17 90.5 83 65.1
BNapus_Darmor_BZH_scaffold_107p00560 Brassica napus HOM05D000920 ORTHO05D004854 6.6e-17 90.5 84 66.7
Nn4g25012 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.5e-16 89.4 49 91.8
Nn5g31173 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.5e-16 88.6 61 82.0
Nn5g31196 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.5e-16 88.6 61 82.0
Nn5g31265 Nelumbo nucifera HOM05D005014 ORTHO05D003704 2.5e-16 88.6 61 82.0
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 5.6e-16 87.4 84 65.5
A06p24420 Brassica napus HOM05D000920 ORTHO05D003704 7.3e-16 87.0 83 63.9
Nn6g33196 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-15 86.3 52 86.5
Manes.S000981 Manihot esculenta HOM05D001319 ORTHO05D000922 2.8e-15 85.1 69 65.2
A09p30600 Brassica napus HOM05D000920 ORTHO05D003704 1.1e-14 83.2 83 61.4
A05p22570 Brassica napus HOM05D000920 ORTHO05D003704 1.4e-14 82.8 84 60.7
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-14 82.8 84 63.1
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-14 82.4 83 61.4
Nn6g32845 Nelumbo nucifera HOM05D039805 ORTHO05D003704 2.4e-14 82.0 55 81.8
Nn6g32864 Nelumbo nucifera HOM05D039805 ORTHO05D003704 2.4e-14 82.0 55 81.8
Nn6g33078 Nelumbo nucifera HOM05D039805 ORTHO05D003704 2.4e-14 82.0 55 81.8
unitig_548.g34904 Utricularia gibba HOM05D000920 ORTHO05D004854 2.4e-14 82.0 82 59.8
A06p25510 Brassica napus HOM05D000920 ORTHO05D004854 4.0e-14 81.3 77 64.9
A05p22400 Brassica napus HOM05D000920 ORTHO05D004854 5.2e-14 80.9 85 58.8
BNapus_Darmor_BZH_scaffold_85p00030 Brassica napus HOM05D000920 ORTHO05D004854 8.9e-14 80.1 85 58.8
Nn116s43393 Nelumbo nucifera HOM05D005014 ORTHO05D003704 4.4e-13 77.8 40 92.5
Nn6g33184 Nelumbo nucifera HOM05D005014 ORTHO05D003704 4.4e-13 77.8 40 92.5
A09p22270 Brassica napus HOM05D000920 ORTHO05D003704 5.8e-13 77.4 80 62.5
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 1.3e-12 76.3 79 60.8
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-12 75.5 83 55.4
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 2.9e-12 75.1 79 60.8
Oeu051370.1 Olea europaea HOM05D005014 ORTHO05D003704 6.4e-12 73.9 55 67.3
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 5.4e-11 70.9 78 55.1
BcaC06g35654 Brassica carinata HOM05D005014 ORTHO05D003704 1.2e-10 69.7 61 67.2
TAR371G1186 Trochodendron aralioides HOM05D005014 ORTHO05D003704 1.3e-09 66.2 39 82.1
Nn6g32066 Nelumbo nucifera HOM05D005014 ORTHO05D003704 3.9e-09 64.7 33 90.9
Lj6g0023052 Lotus japonicus HOM05D005014 ORTHO05D003704 5.1e-09 64.3 35 88.6
unitig_668.g29653 Utricularia gibba HOM05D000920 ORTHO05D003704 2.5e-08 62.0 64 59.4
Nn5g28932 Nelumbo nucifera HOM05D005014 ORTHO05D003704 3.3e-08 61.6 40 82.5
BcaB04g16911 Brassica carinata HOM05D000920 ORTHO05D004854 7.3e-08 60.5 28 100.0
ScUNg0001120 Simmondsia chinensis HOM05D000920 ORTHO05D004854 7.3e-08 60.5 28 100.0
Nn046s41831 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn046s41854 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn046s41900 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn059s42061 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn061s42103 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn185s44633 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn185s44656 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn208s45124 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn247s45823 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
Nn3g20844 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.2e-07 59.7 29 100.0
BcaNung05884 Brassica carinata HOM05D000920 ORTHO05D004854 2.1e-07 58.9 28 96.4
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-07 58.9 29 93.1
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 2.1e-07 58.9 27 100.0
QL93p0107_0631 Quercus lobata HOM05D005014 ORTHO05D003704 2.8e-07 58.5 35 80.0
Nn3g20821 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.2e-07 57.4 31 83.9
Nn8g40332 Nelumbo nucifera HOM05D005014 ORTHO05D003704 1.4e-06 56.2 26 100.0
CBR_g41012 Chara braunii HOM05D010018 ORTHO05D003704 1.8e-06 55.8 84 45.2
Nn078s42649 Nelumbo nucifera HOM05D005014 ORTHO05D003704 3.1e-06 55.1 26 96.2
Nn1g08343 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.9e-06 53.9 25 96.0
Nn6g31804 Nelumbo nucifera HOM05D005014 ORTHO05D003704 6.9e-06 53.9 26 96.2


User provided reference genes

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