Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 4.8e-271 937.2 454 100.0
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 5.7e-232 807.4 451 84.9
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 8.6e-220 766.9 442 81.7
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 3.0e-212 741.9 457 77.5
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 3.9e-212 741.5 453 78.6
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.9e-211 739.2 423 81.6
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.6e-210 736.1 423 81.1
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 6.8e-209 730.7 454 76.2
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 7.5e-208 727.2 435 78.6
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 3.7e-207 724.9 418 80.4
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 3.2e-206 721.8 408 81.4
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 3.2e-206 721.8 437 77.6
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 9.2e-206 720.3 439 79.3
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 2.3e-204 715.7 450 76.0
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.3e-204 715.7 418 79.2
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 3.9e-204 714.9 436 78.7
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 5.0e-204 714.5 453 75.3
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 9.5e-203 710.3 448 76.8
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 9.5e-203 710.3 453 74.4
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.8e-201 704.1 442 76.5
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 8.9e-201 703.7 450 75.8
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 8.9e-201 703.7 420 78.6
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.5e-200 703.0 423 76.8
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.6e-200 702.2 426 76.3
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.6e-200 702.2 446 72.9
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 5.8e-200 701.0 438 77.2
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.9e-200 700.3 417 78.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.4e-198 696.4 439 74.0
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.4e-198 695.7 420 77.4
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 5.4e-198 694.5 425 76.2
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 9.2e-198 693.7 442 74.0
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 9.2e-198 693.7 426 74.6
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.2e-197 693.3 457 73.7
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.6e-197 693.0 438 74.4
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.6e-197 693.0 422 79.4
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.6e-197 693.0 439 75.2
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.7e-197 692.2 443 74.0
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 3.5e-197 691.8 438 74.4
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 3.5e-197 691.8 451 73.8
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 6.0e-197 691.0 414 77.1
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 7.8e-197 690.6 442 75.1
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.7e-196 689.5 442 74.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 3.9e-196 688.3 422 76.1
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 8.6e-196 687.2 452 74.1
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.9e-195 686.0 482 69.1
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 3.6e-194 681.8 422 75.4
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 3.6e-194 681.8 431 74.0
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.1e-193 680.2 439 74.7
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.8e-193 679.5 422 75.1
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 2.4e-193 679.1 422 75.4
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 2.4e-193 679.1 422 75.4
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.4e-193 679.1 480 70.6
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 2.6e-192 675.6 420 74.5
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 2.6e-192 675.6 422 74.4
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.6e-192 675.6 439 74.7
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.6e-192 675.6 580 60.5
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 5.8e-192 674.5 420 76.0
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.7e-191 672.9 422 75.1
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 4.1e-190 668.3 423 74.9
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 4.6e-189 664.8 557 62.5
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 1.5e-187 659.8 426 72.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 9.6e-187 657.1 438 70.5
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 7.6e-184 647.5 392 78.6
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 7.6e-184 647.5 407 74.2
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 3.3e-179 632.1 422 71.8
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 3.6e-178 628.6 422 71.8
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 5.8e-176 621.3 364 78.8
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.3e-175 620.2 453 68.7
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 3.2e-174 615.5 378 76.5
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 4.2e-174 615.1 372 79.3
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 5.4e-174 614.8 409 71.4
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 6.0e-173 611.3 377 75.1
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 3.9e-172 608.6 361 79.5
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.8e-170 601.7 453 66.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 4.6e-165 585.1 396 73.0
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 9.6e-163 577.4 365 75.3
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.2e-159 566.2 388 71.6
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 3.3e-155 552.4 320 80.9
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.9e-153 544.7 376 68.6
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.0e-151 540.8 379 68.3
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.4e-150 537.0 336 76.8
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 2.7e-149 532.7 424 63.2
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 4.6e-149 531.9 350 70.9
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.9e-143 512.7 338 71.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.0e-132 477.6 285 78.9
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 5.9e-128 461.8 376 60.4
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 6.3e-122 441.8 403 52.6
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 5.5e-118 428.7 456 47.6
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.3e-114 417.5 403 48.1
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 6.3e-114 415.2 314 63.4
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 3.1e-113 412.9 426 48.4
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 2.0e-104 383.6 234 76.5
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 6.0e-96 355.5 215 75.3
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 3.5e-88 329.7 200 77.0
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.6e-88 329.3 265 61.5
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.3e-68 262.7 187 72.2
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.0e-67 260.8 427 38.2
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.9e-63 246.5 155 76.8
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.8e-60 237.7 126 86.5
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 7.1e-57 225.7 408 34.1
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 2.7e-48 197.2 227 47.1
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.2e-43 181.8 412 29.9
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-41 172.2 177 46.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.6e-40 171.4 437 30.4
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.1e-38 165.2 88 85.2
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 4.1e-36 156.8 89 82.0
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 2.9e-34 150.6 125 60.8
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 6.7e-31 139.4 114 59.6
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 4.1e-28 130.2 83 77.1
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 5.9e-27 126.3 125 48.8
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.4e-25 121.7 72 79.2
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.0e-19 101.3 65 72.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 3.8e-18 97.1 73 60.3
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.0e-15 89.0 45 88.9
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.3e-15 87.8 87 47.1
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.6e-11 75.1 53 62.3
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.2e-10 71.2 62 54.8
arahy.Tifrunner.gnm1.ann1.JG4R8Z Arachis hypogaea HOM05D034686 ORTHO05D082558 2.0e-06 58.2 109 34.9


User provided reference genes

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