Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07686 Nelumbo nucifera HOM05D000054 ORTHO05D277627 1.1e-50 203.0 103 100.0
Nn5g28427 Nelumbo nucifera HOM05D000054 ORTHO05D002398 2.2e-22 109.0 99 64.6
Nn5g29148 Nelumbo nucifera HOM05D000054 ORTHO05D002398 7.8e-20 100.5 99 59.6
Nn1g08852 Nelumbo nucifera HOM05D000054 ORTHO05D002398 2.8e-17 92.0 98 59.2
Nn3g21893 Nelumbo nucifera HOM05D000054 ORTHO05D002398 8.4e-14 80.5 60 70.0
Nn1g08982 Nelumbo nucifera HOM05D000054 ORTHO05D002398 3.5e-12 75.1 89 52.8
Nn1g08983 Nelumbo nucifera HOM05D000054 ORTHO05D002398 3.5e-12 75.1 89 52.8
TAR625G0138 Trochodendron aralioides HOM05D000054 ORTHO05D002398 4.8e-09 64.7 99 42.4
TWI59G0685 Tripterygium wilfordii HOM05D000054 ORTHO05D002398 6.2e-09 64.3 100 44.0
Ciclev10004007m.g Citrus clementina HOM05D000054 ORTHO05D002398 1.1e-08 63.5 100 44.0
FAN08G3330 Fragaria x ananassa HOM05D000054 ORTHO05D002398 1.1e-08 63.5 98 43.9
FvH4_5g29100 Fragaria vesca HOM05D000054 ORTHO05D002398 1.4e-08 63.2 98 43.9
FAN13G2271 Fragaria x ananassa HOM05D000054 ORTHO05D002398 1.4e-08 63.2 98 43.9
FAN18G0392 Fragaria x ananassa HOM05D000054 ORTHO05D002398 1.4e-08 63.2 98 43.9
TWI14G1080 Tripterygium wilfordii HOM05D000054 ORTHO05D002398 1.8e-08 62.8 100 44.0
Oeu036662.1 Olea europaea HOM05D000054 ORTHO05D002398 3.1e-08 62.0 67 55.2
Nitab4.5_0000816g0060 Nicotiana tabacum HOM05D000054 ORTHO05D002398 5.3e-08 61.2 91 46.2
FAN04G1399 Fragaria x ananassa HOM05D000054 ORTHO05D002398 6.9e-08 60.8 98 42.9
TAR628G0661 Trochodendron aralioides HOM05D000054 ORTHO05D002398 9.0e-08 60.5 103 40.8
arahy.Tifrunner.gnm1.ann1.I412IB Arachis hypogaea HOM05D000054 ORTHO05D002398 1.5e-07 59.7 102 41.2
arahy.Tifrunner.gnm1.ann1.Q96MZI Arachis hypogaea HOM05D000054 ORTHO05D002398 1.5e-07 59.7 102 41.2
Hma1.2p1_0010F.1_g006910 Hydrangea macrophylla HOM05D000054 ORTHO05D002398 1.5e-07 59.7 68 52.9
Nitab4.5_0010336g0010 Nicotiana tabacum HOM05D000054 ORTHO05D002398 1.5e-07 59.7 91 45.1
Lalb_Chr20g0123531 Lupinus albus HOM05D000054 ORTHO05D002398 2.0e-07 59.3 68 51.5
Sopen01g046460 Solanum pennellii HOM05D000054 ORTHO05D002398 2.6e-07 58.9 93 45.2
Dinv24295 Davidia involucrata HOM05D000054 ORTHO05D002398 3.4e-07 58.5 95 41.1
Manes.10G125700 Manihot esculenta HOM05D000054 ORTHO05D002398 3.4e-07 58.5 101 42.6
PGSC0003DMG400023814 Solanum tuberosum HOM05D000054 ORTHO05D002398 3.4e-07 58.5 93 44.1
vmacro19884 Vaccinium macrocarpon HOM05D000054 ORTHO05D002398 3.4e-07 58.5 67 52.2
Manes.07G017900 Manihot esculenta HOM05D000054 ORTHO05D002398 4.5e-07 58.2 100 43.0
CAN.G798.9 Capsicum annuum HOM05D000054 ORTHO05D002398 5.8e-07 57.8 93 45.2
CAN.G798.11 Capsicum annuum HOM05D000054 ORTHO05D002398 7.6e-07 57.4 93 44.1
RcHm_v2.0_Chr7g0221741 Rosa chinensis HOM05D000054 ORTHO05D002398 7.6e-07 57.4 100 41.0
arahy.Tifrunner.gnm1.ann1.S2GGLU Arachis hypogaea HOM05D002649 ORTHO05D002838 9.9e-07 57.0 102 40.2
MSTRG.5225 Avicennia marina HOM05D000054 ORTHO05D002398 9.9e-07 57.0 94 42.6
CiPaw.06G146400 Carya illinoinensis HOM05D000054 ORTHO05D002398 9.9e-07 57.0 93 41.9
Solyc01g104050.4 Solanum lycopersicum HOM05D000054 ORTHO05D002398 1.3e-06 56.6 93 43.0
Prupe.1G571200 Prunus persica HOM05D000054 ORTHO05D002398 1.7e-06 56.2 100 43.0
arahy.Tifrunner.gnm1.ann1.V2LZHF Arachis hypogaea HOM05D000054 ORTHO05D002398 2.2e-06 55.8 69 49.3
Haze_01736 Corylus avellana HOM05D000054 ORTHO05D002398 2.2e-06 55.8 73 49.3
Sabra17G0110000 Salix brachista HOM05D000054 ORTHO05D002398 2.9e-06 55.5 102 44.1
CSS0018509 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D002398 3.8e-06 55.1 97 40.2
Rhsim05G0044000 Rhododendron simsii HOM05D000054 ORTHO05D002398 3.8e-06 55.1 66 54.5
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 4.9e-06 54.7 70 48.6
Migut.B00821 Erythranthe guttata HOM05D000054 ORTHO05D002398 6.4e-06 54.3 101 35.6
Lj5A253G31 Lonicera japonica HOM05D000054 ORTHO05D002398 6.4e-06 54.3 101 36.6
Lj6g0012799 Lotus japonicus HOM05D000054 ORTHO05D002398 8.4e-06 53.9 91 39.6
MD15G1427400 Malus domestica HOM05D000054 ORTHO05D002398 8.4e-06 53.9 99 40.4


User provided reference genes

Program Settings