Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 3.3e-101 371.7 185 100.0
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 4.1e-43 178.7 131 69.5
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 4.4e-37 158.7 92 79.3
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 6.3e-36 154.8 136 62.5
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 2.4e-35 152.9 103 70.9
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 2.4e-35 152.9 134 62.7
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 9.1e-35 151.0 86 82.6
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 5.9e-34 148.3 89 78.7
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 2.9e-33 146.0 141 61.0
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.1e-32 144.1 83 77.1
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 1.4e-32 143.7 143 56.6
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 2.5e-32 142.9 139 56.8
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 3.2e-32 142.5 81 82.7
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 3.2e-32 142.5 83 77.1
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 7.2e-32 141.4 82 79.3
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.6e-31 140.2 88 77.3
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 2.7e-31 139.4 86 75.6
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 4.7e-31 138.7 92 75.0
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 7.9e-31 137.9 82 78.0
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 7.9e-31 137.9 134 56.7
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 2.3e-30 136.3 82 75.6
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 8.8e-30 134.4 84 76.2
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 1.1e-29 134.0 99 61.6
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 2.6e-29 132.9 101 65.3
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 3.3e-29 132.5 82 74.4
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 3.3e-29 132.5 130 51.5
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 4.4e-29 132.1 132 56.1
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 5.7e-29 131.7 102 59.8
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 5.7e-29 131.7 138 50.7
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 7.4e-29 131.3 84 72.6
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 7.4e-29 131.3 84 72.6
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 7.4e-29 131.3 88 67.0
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.3e-28 130.6 109 60.6
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.3e-28 130.6 83 69.9
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 1.7e-28 130.2 91 70.3
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 2.8e-28 129.4 84 66.7
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 2.8e-28 129.4 84 66.7
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 2.8e-28 129.4 96 62.5
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 3.7e-28 129.0 143 46.9
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 4.8e-28 128.6 141 52.5
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 6.3e-28 128.3 84 69.0
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 8.2e-28 127.9 145 49.7
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 8.2e-28 127.9 89 66.3
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 1.1e-27 127.5 93 67.7
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.4e-27 127.1 106 64.2
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 1.4e-27 127.1 122 55.7
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.4e-27 127.1 88 70.5
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 1.4e-27 127.1 133 54.1
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 2.4e-27 126.3 77 70.1
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 2.4e-27 126.3 84 65.5
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 3.1e-27 125.9 84 65.5
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.3e-27 125.2 106 58.5
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 5.3e-27 125.2 88 65.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 9.1e-27 124.4 77 68.8
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 1.2e-26 124.0 95 66.3
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.6e-26 123.6 92 66.3
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.5e-26 122.1 92 62.0
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 4.5e-26 122.1 68 73.5
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 4.5e-26 122.1 120 59.2
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 5.9e-26 121.7 74 75.7
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 7.7e-26 121.3 91 67.0
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 1.0e-25 120.9 111 55.0
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.3e-25 120.6 142 46.5
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 3.8e-25 119.0 138 52.9
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 1.1e-24 117.5 102 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 3.2e-24 115.9 101 53.5
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 7.2e-24 114.8 90 58.9
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 9.4e-24 114.4 137 48.9
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 1.6e-23 113.6 81 65.4
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 1.6e-23 113.6 70 77.1
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 2.1e-23 113.2 68 76.5
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 2.7e-23 112.8 98 53.1
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 4.7e-23 112.1 82 69.5
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 2.6e-21 106.3 122 49.2
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 2.6e-21 106.3 122 49.2
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.3e-21 105.9 142 45.8
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.4e-21 105.5 74 68.9
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.4e-21 105.5 77 66.2
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 4.4e-21 105.5 69 72.5
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 5.7e-21 105.1 133 48.9
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 7.5e-21 104.8 141 46.8
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 4.8e-20 102.1 124 45.2
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 4.8e-20 102.1 85 63.5
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 1.1e-19 100.9 77 59.7
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 4.5e-18 95.5 72 66.7
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 1.1e-16 90.9 66 66.7
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 2.5e-16 89.7 74 60.8
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 2.3e-14 83.2 72 55.6
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 5.2e-14 82.0 68 58.8
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 8.8e-14 81.3 78 50.0
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 1.7e-12 77.0 48 79.2
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 1.8e-11 73.6 87 44.8
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 2.9e-09 66.2 47 76.6
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 5.0e-09 65.5 54 59.3
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.1e-08 64.3 59 57.6
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 1.9e-08 63.5 78 47.4
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 6.1e-07 58.5 37 73.0


User provided reference genes

Program Settings