Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 2.6e-94 348.6 165 100.0
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 7.6e-25 117.9 74 71.6
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 9.9e-25 117.5 88 60.2
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 3.8e-24 115.5 75 64.0
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 8.4e-24 114.4 88 59.1
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 8.4e-24 114.4 69 71.0
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.2e-23 112.5 74 67.6
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 4.2e-23 112.1 75 66.7
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 4.2e-23 112.1 73 67.1
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 5.4e-23 111.7 70 70.0
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 5.4e-23 111.7 73 64.4
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 7.1e-23 111.3 75 62.7
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 7.1e-23 111.3 75 62.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.2e-22 110.5 91 56.0
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.2e-22 110.5 72 63.9
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 1.6e-22 110.2 74 68.9
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.1e-22 109.8 75 62.7
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.7e-22 109.4 75 62.7
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 3.5e-22 109.0 74 62.2
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 3.5e-22 109.0 72 62.5
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.6e-22 108.6 72 62.5
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 4.6e-22 108.6 88 58.0
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 6.0e-22 108.2 75 61.3
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 7.9e-22 107.8 76 61.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 7.9e-22 107.8 72 62.5
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.0e-21 107.5 75 58.7
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 1.0e-21 107.5 90 56.7
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.3e-21 107.1 71 67.6
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.8e-21 106.7 73 63.0
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.3e-21 106.3 73 61.6
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 2.3e-21 106.3 73 61.6
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 3.0e-21 105.9 74 63.5
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 3.0e-21 105.9 75 61.3
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 6.7e-21 104.8 88 55.7
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 8.7e-21 104.4 90 56.7
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 8.7e-21 104.4 72 61.1
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-20 104.0 72 62.5
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.1e-20 104.0 89 53.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.5e-20 103.6 90 55.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.5e-20 103.6 73 57.5
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.9e-20 103.2 90 55.6
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 7.4e-20 101.3 136 37.5
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 7.4e-20 101.3 73 63.0
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 7.4e-20 101.3 70 62.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 7.4e-20 101.3 70 61.4
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 9.6e-20 100.9 89 56.2
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.3e-19 100.5 72 56.9
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.3e-19 100.5 70 60.0
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-19 100.1 110 43.6
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-19 100.1 76 56.6
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-19 100.1 110 43.6
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-19 100.1 110 43.6
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.6e-19 100.1 72 56.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.8e-19 99.4 73 61.6
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 3.6e-19 99.0 71 60.6
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 3.6e-19 99.0 76 56.6
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 6.2e-19 98.2 70 60.0
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 8.1e-19 97.8 73 60.3
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 8.1e-19 97.8 72 59.7
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 2.4e-18 96.3 72 54.2
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 2.4e-18 96.3 72 61.1
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 4.0e-18 95.5 89 47.2
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.3e-18 95.1 95 51.6
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 9.0e-18 94.4 73 56.2
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 9.0e-18 94.4 73 56.2
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 9.0e-18 94.4 71 57.7
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 1.2e-17 94.0 73 54.8
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 1.2e-17 94.0 73 54.8
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 3.4e-17 92.4 73 54.8
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 4.5e-17 92.0 73 53.4
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 7.6e-17 91.3 73 52.1
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 7.6e-17 91.3 73 53.4
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 9.9e-17 90.9 54 70.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.7e-16 90.1 78 53.8
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.9e-16 88.6 107 41.1
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 1.1e-15 87.4 54 68.5
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.1e-15 87.4 54 70.4
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 2.7e-14 82.8 53 60.4
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.3e-13 80.5 60 53.3
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 6.7e-13 78.2 60 53.3
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 8.7e-13 77.8 63 50.8
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 2.5e-12 76.3 70 45.7
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 3.3e-12 75.9 67 50.7
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 5.6e-12 75.1 53 60.4
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 5.6e-12 75.1 56 58.9
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 9.6e-12 74.3 53 56.6
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.3e-11 73.9 67 50.7
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.6e-11 73.6 46 69.6
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 2.8e-11 72.8 57 54.4
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 3.7e-11 72.4 57 54.4
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 3.7e-11 72.4 57 54.4
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 8.1e-11 71.2 61 49.2
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 6.9e-10 68.2 73 46.6
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 9.0e-10 67.8 78 39.7
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 4.5e-09 65.5 72 38.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.9e-08 62.8 45 55.6
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 6.5e-08 61.6 53 50.9
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 7.1e-07 58.2 61 42.6
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 9.3e-07 57.8 63 46.0


User provided reference genes

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