Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.2e-104 383.3 211 100.0
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 3.6e-64 248.8 215 68.4
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 2.7e-59 232.6 214 67.3
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.3e-58 229.6 214 61.2
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 5.1e-58 228.4 209 64.6
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.9e-57 226.5 217 65.4
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 4.3e-57 225.3 216 58.8
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.1e-56 223.0 208 60.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.1e-56 223.0 213 67.6
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.1e-56 223.0 212 66.5
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.1e-56 223.0 212 66.5
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 8.1e-56 221.1 213 62.9
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 2.4e-55 219.5 213 64.3
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 6.9e-55 218.0 212 65.1
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 5.8e-54 214.9 209 63.2
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 2.2e-53 213.0 215 63.3
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.8e-53 212.2 210 59.5
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 4.9e-53 211.8 216 60.6
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 6.5e-53 211.5 226 54.9
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 3.2e-52 209.1 222 61.3
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 5.5e-52 208.4 211 62.1
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 3.5e-51 205.7 221 60.6
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 4.6e-51 205.3 213 60.6
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 6.0e-51 204.9 270 48.9
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.0e-50 204.1 214 60.7
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.0e-50 202.6 211 59.7
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 6.7e-50 201.4 212 58.0
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 3.3e-49 199.1 220 60.0
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 4.3e-49 198.7 215 57.2
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 4.3e-49 198.7 211 54.5
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.3e-48 197.2 211 59.2
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 3.7e-48 195.7 219 56.2
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 4.8e-48 195.3 211 55.5
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 8.2e-48 194.5 220 58.6
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 8.2e-48 194.5 217 53.0
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.2e-48 194.5 216 58.3
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 3.1e-47 192.6 211 57.3
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 4.1e-47 192.2 214 55.6
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.6e-46 189.5 213 55.4
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.2e-45 186.4 223 52.9
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.2e-45 186.4 219 52.5
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 3.8e-45 185.7 179 56.4
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 6.5e-45 184.9 216 51.4
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 1.1e-44 184.1 223 52.0
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.4e-44 183.7 189 59.8
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.9e-44 183.3 219 53.9
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.9e-44 183.3 158 67.7
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 2.5e-44 183.0 221 54.8
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 3.2e-44 182.6 213 57.7
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 3.2e-44 182.6 175 56.6
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 4.2e-44 182.2 218 53.7
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 9.3e-44 181.0 217 54.8
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 6.1e-43 178.3 175 59.4
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.0e-42 177.6 213 54.9
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.8e-42 176.8 219 52.1
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 2.3e-42 176.4 177 62.7
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 3.1e-39 166.0 189 55.0
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 6.9e-39 164.9 150 68.0
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 9.0e-39 164.5 162 63.6
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.5e-38 163.7 212 47.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 4.5e-38 162.2 212 51.4
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.2e-37 159.8 217 52.1
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 5.0e-37 158.7 150 57.3
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 1.9e-36 156.8 207 48.3
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 7.2e-36 154.8 152 59.2
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.7e-35 152.9 193 51.8
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 7.9e-35 151.4 148 62.2
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.0e-34 151.0 156 57.1
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 3.0e-34 149.4 205 49.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 3.9e-34 149.1 185 44.3
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 1.1e-33 147.5 195 51.3
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.5e-33 147.1 201 47.8
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 3.3e-33 146.0 178 56.2
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 5.7e-33 145.2 178 54.5
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 7.4e-33 144.8 219 44.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.7e-32 143.7 168 51.8
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 3.7e-32 142.5 185 50.8
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 8.2e-32 141.4 181 50.3
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 3.1e-31 139.4 162 54.9
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 6.9e-31 138.3 168 51.8
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 6.9e-31 138.3 182 49.5
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 9.1e-31 137.9 167 50.9
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 9.1e-31 137.9 167 50.9
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 2.0e-30 136.7 194 49.5
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 2.0e-30 136.7 194 49.5
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 1.0e-29 134.4 209 45.9
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 2.9e-29 132.9 148 56.8
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.9e-29 132.9 167 50.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.9e-29 132.9 167 50.9
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.2e-28 129.0 127 66.1
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.2e-27 127.5 174 50.0
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 1.6e-27 127.1 155 48.4
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.7e-27 126.3 98 63.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 1.8e-26 123.6 162 53.7
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 5.7e-25 118.6 139 56.1
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 9.1e-23 111.3 126 60.3
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 6.1e-19 98.6 140 47.9
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 1.4e-18 97.4 212 33.0
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 1.8e-18 97.1 97 47.4
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 1.8e-18 97.1 97 47.4
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.5e-17 94.0 187 41.7
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 5.7e-17 92.0 165 34.5
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 9.1e-15 84.7 151 46.4
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 3.8e-13 79.3 187 40.1
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.1e-12 77.8 211 30.3
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.5e-12 76.6 186 38.2
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.4e-07 58.9 165 39.4
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 5.4e-07 58.9 165 39.4


User provided reference genes

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