Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 0.0e+00 1159.4 579 100.0
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 3.6e-279 964.5 574 82.9
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 1.3e-273 946.0 576 80.7
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 4.2e-272 941.0 579 80.8
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 1.7e-268 929.1 579 80.0
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 4.8e-268 927.5 576 79.2
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 5.9e-266 920.6 576 78.8
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 7.7e-266 920.2 567 81.5
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 1.3e-265 919.5 570 79.1
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 6.1e-263 910.6 571 79.9
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 3.0e-262 908.3 578 79.4
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 8.8e-262 906.7 574 78.2
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 1.5e-261 906.0 562 79.9
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 5.7e-261 904.0 577 78.0
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 2.8e-260 901.7 571 78.5
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 3.7e-260 901.4 575 78.6
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 8.3e-260 900.2 570 79.6
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 1.1e-259 899.8 569 77.9
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 2.4e-259 898.7 576 76.4
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 2.4e-259 898.7 576 79.0
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 3.1e-259 898.3 577 77.1
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 5.4e-259 897.5 569 78.2
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 9.1e-259 896.7 577 78.7
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 9.1e-259 896.7 577 78.7
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 1.7e-257 892.5 577 78.5
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 2.9e-257 891.7 571 77.4
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 3.8e-257 891.3 571 76.7
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.9e-256 889.0 576 78.5
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 1.6e-255 885.9 565 78.1
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 4.7e-255 884.4 565 77.0
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 8.9e-254 880.2 564 76.2
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 1.5e-253 879.4 565 76.6
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 7.5e-253 877.1 565 76.6
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 2.8e-252 875.2 559 76.4
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 4.9e-252 874.4 571 76.4
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 5.4e-251 870.9 562 77.6
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 1.6e-250 869.4 570 76.0
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 1.6e-250 869.4 558 77.1
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 1.3e-249 866.3 562 77.4
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 2.9e-249 865.1 574 74.7
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 3.9e-249 864.8 572 73.3
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 3.9e-249 864.8 561 76.5
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 5.0e-249 864.4 572 74.0
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 1.5e-248 862.8 607 71.7
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 3.3e-248 861.7 563 75.7
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 9.5e-248 860.1 560 76.2
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 9.5e-248 860.1 572 73.3
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 1.2e-247 859.8 560 76.4
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 1.2e-247 859.8 560 76.4
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 1.6e-247 859.4 574 75.3
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 1.8e-246 855.9 572 72.9
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 4.0e-246 854.7 576 73.8
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 6.8e-246 854.0 574 73.5
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 5.8e-245 850.9 568 75.5
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 2.2e-244 849.0 604 71.5
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 2.9e-244 848.6 572 74.1
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 6.4e-244 847.4 578 72.8
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 2.4e-243 845.5 567 74.3
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 7.0e-243 844.0 563 76.2
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 1.7e-241 839.3 571 72.5
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 1.1e-240 836.6 559 73.5
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 4.3e-240 834.7 573 71.7
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 4.3e-240 834.7 575 71.3
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 4.3e-240 834.7 575 71.3
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 5.6e-240 834.3 566 73.0
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 9.5e-240 833.6 565 74.5
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 1.6e-239 832.8 573 71.7
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 6.2e-239 830.9 573 71.6
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 8.0e-239 830.5 568 72.2
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 2.6e-237 825.5 569 72.9
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 2.6e-237 825.5 579 71.3
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 3.4e-237 825.1 617 68.2
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 4.9e-236 821.2 575 72.7
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 2.4e-235 818.9 555 74.4
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 6.0e-234 814.3 569 71.2
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 7.8e-234 813.9 575 73.4
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 1.7e-233 812.8 594 70.5
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 1.2e-229 800.0 577 71.1
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 1.6e-215 753.1 574 66.0
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 6.2e-215 751.1 569 67.3
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 9.0e-214 747.3 466 79.0
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 1.7e-212 743.0 559 69.2
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 1.7e-212 743.0 645 61.4
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 4.8e-207 724.9 464 77.6
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 1.2e-205 720.3 459 76.7
vmacro09381 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 4.2e-195 685.3 421 80.0
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 4.5e-189 665.2 410 79.8
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 3.4e-181 639.0 415 76.4
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 1.1e-179 634.0 627 55.7
Lalb_Chr24g0402731 Lupinus albus HOM05D006660 ORTHO05D008184 9.4e-179 630.9 419 75.2
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 5.1e-177 625.2 403 77.4
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 6.3e-175 618.2 631 52.9
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 6.3e-175 618.2 631 52.9
CDE07G0400 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 2.7e-170 602.8 408 73.8
VMungo1309G1541 Vigna mungo HOM05D006660 ORTHO05D008184 2.7e-170 602.8 432 70.6
ATR0712G111 Amborella trichopoda HOM05D006660 ORTHO05D008184 6.1e-170 601.7 416 73.3
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 7.0e-166 588.2 406 73.2
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 2.1e-162 576.6 575 55.5
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 3.2e-155 552.7 546 53.5
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 7.5e-144 515.0 315 79.0
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 1.0e-140 504.6 309 80.9
Hund08409 Selenicereus undatus HOM05D006660 ORTHO05D008184 4.0e-129 466.1 329 69.3
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 6.4e-127 458.8 557 47.0
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 1.5e-123 447.6 663 40.4
Lj8C132T7 Lonicera japonica HOM05D006660 ORTHO05D008184 1.7e-108 397.5 232 84.9
GSVIVG01030416001 Vitis vinifera HOM05D006660 ORTHO05D008184 1.6e-93 347.8 196 86.2
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 8.1e-82 308.9 567 36.7
Oeu040483.1 Olea europaea HOM05D006660 ORTHO05D008184 3.1e-73 280.4 163 85.3
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 1.1e-65 255.4 415 39.0
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.7e-63 248.1 144 79.9
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 3.0e-60 237.3 145 75.9
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 1.2e-56 225.3 120 88.3
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 6.5e-55 219.5 116 88.8
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 4.1e-49 200.3 104 90.4
Atru.chr6.3319 Acer truncatum HOM05D006660 ORTHO05D008184 8.8e-44 182.6 157 62.4
Cpa.g.sc987.1 Carica papaya HOM05D006660 ORTHO05D008184 2.2e-42 177.9 110 80.0
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 1.8e-36 158.3 182 50.5
HanXRQChr08g0218831 Helianthus annuus HOM05D006660 ORTHO05D008184 4.4e-27 127.1 67 88.1
CDE04G2605 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 9.2e-17 92.8 54 75.9
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 4.0e-12 77.4 445 23.8
Os08g0523850 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D008184 1.0e-07 62.8 159 33.3
Cre04.g218400 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.3e-07 62.4 123 34.1
Cre04.g212100 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 8.6e-07 59.7 135 31.1
Pp3c11_17010 Physcomitrium patens HOM05D002203 ORTHO05D002647 4.3e-06 57.4 92 32.6
Cc02_g07400 Coffea canephora HOM05D000563 ORTHO05D000536 9.5e-06 56.2 171 26.9
Os10g0425900 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 9.5e-06 56.2 179 26.3


User provided reference genes

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